UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6YJU designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6YJU_UDP_AAA_801 | 87% | 32% | 0.106 | 0.978 | 0.98 | 1.71 | 2 | 6 | 0 | 0 | 100% | 0.8 |
6YJU_UDP_BBB_801 | 75% | 29% | 0.147 | 0.981 | 1.07 | 1.76 | 2 | 6 | 1 | 0 | 100% | 0.7 |
6YJT_UDP_BBB_802 | 95% | 32% | 0.086 | 0.99 | 0.99 | 1.7 | 1 | 9 | 0 | 0 | 100% | 1 |
9F5H_UDP_B_801 | 92% | 57% | 0.073 | 0.964 | 0.8 | 0.84 | - | 1 | 0 | 0 | 100% | 0.7 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |