GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6OJE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6OJE_GDP_B_1602 | 91% | 51% | 0.096 | 0.984 | 0.77 | 1.1 | - | 3 | 0 | 0 | 100% | 1 |
| 6OJE_GDP_A_1602 | 87% | 47% | 0.107 | 0.98 | 0.94 | 1.1 | 1 | 2 | 0 | 0 | 100% | 1 |
| 2ZEJ_GDP_B_2 | 98% | 29% | 0.064 | 0.988 | 1.3 | 1.52 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3D6T_GDP_B_1 | 94% | 25% | 0.08 | 0.981 | 1.07 | 1.95 | 1 | 8 | 0 | 0 | 100% | 1 |
| 6XAF_GDP_A_1602 | 88% | 5% | 0.1 | 0.975 | 3.89 | 1.64 | 14 | 7 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
