UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6KVI designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6KVI_UDP_A_501 | 73% | 35% | 0.16 | 0.989 | 0.97 | 1.57 | - | 6 | 1 | 0 | 100% | 1 |
6INH_UDP_A_501 | 95% | 35% | 0.081 | 0.983 | 1.14 | 1.42 | 3 | 6 | 0 | 0 | 100% | 1 |
6INF_UDP_A_501 | 94% | 35% | 0.078 | 0.978 | 1.23 | 1.33 | 3 | 6 | 0 | 0 | 100% | 1 |
6INI_UDP_A_501 | 93% | 34% | 0.089 | 0.985 | 1.21 | 1.38 | 3 | 5 | 0 | 0 | 100% | 1 |
6KVL_UDP_A_501 | 91% | 10% | 0.09 | 0.975 | 1.96 | 2.29 | 6 | 8 | 0 | 0 | 100% | 1 |
6O88_UDP_A_500 | 91% | 30% | 0.096 | 0.981 | 0.95 | 1.83 | - | 7 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |