UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6KIH designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6KIH_UDP_B_701 | 81% | 3% | 0.115 | 0.968 | 3.25 | 2.68 | 13 | 10 | 0 | 0 | 100% | 1 |
6KIH_UDP_A_602 | 72% | 3% | 0.137 | 0.962 | 3.31 | 2.83 | 15 | 11 | 3 | 0 | 100% | 1 |
6KIH_UDP_G_701 | 71% | 4% | 0.136 | 0.957 | 3.12 | 2.67 | 13 | 11 | 1 | 0 | 100% | 1 |
6KIH_UDP_F_602 | 67% | 3% | 0.144 | 0.952 | 3.53 | 2.82 | 14 | 13 | 2 | 0 | 100% | 1 |
6KIH_UDP_C_602 | 66% | 3% | 0.147 | 0.954 | 3.23 | 2.76 | 12 | 12 | 2 | 0 | 100% | 1 |
6KIH_UDP_E_602 | 65% | 3% | 0.156 | 0.959 | 3.34 | 2.9 | 13 | 14 | 3 | 0 | 100% | 1 |
6KIH_UDP_H_602 | 64% | 3% | 0.144 | 0.944 | 3.29 | 2.81 | 13 | 13 | 2 | 0 | 100% | 1 |
6KIH_UDP_D_602 | 64% | 2% | 0.153 | 0.952 | 3.51 | 2.98 | 15 | 12 | 2 | 0 | 100% | 1 |
6KIH_UDP_K_602 | 62% | 3% | 0.149 | 0.942 | 3.39 | 2.88 | 14 | 14 | 3 | 0 | 100% | 1 |
6KIH_UDP_I_602 | 59% | 3% | 0.152 | 0.935 | 3.24 | 2.81 | 12 | 13 | 3 | 0 | 100% | 1 |
6KIH_UDP_J_701 | 35% | 3% | 0.214 | 0.902 | 3.34 | 2.66 | 12 | 14 | 1 | 0 | 100% | 1 |
6KIH_UDP_L_602 | 32% | 2% | 0.216 | 0.889 | 3.43 | 3.05 | 12 | 14 | 3 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
6GX2_UDP_A_402 | 99% | 52% | 0.053 | 0.989 | 0.86 | 1.01 | - | 2 | 0 | 0 | 100% | 1 |