AKN: (2S)-N-[(1R,2S,3S,4R,5S)-4-[(2R,3R,4S,5S,6R)-6-(aminomethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-azanyl-2-[(2S,3R,4S,5S ,6R)-4-azanyl-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-cyclohexyl]-4-azanyl-2-oxidanyl-butanamide
AKN is a Ligand Of Interest in 6CGD designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6CGD_AKN_A_600 | 12% | 55% | 0.215 | 0.842 | 0.48 | 1.04 | - | 3 | 2 | 0 | 100% | 0.6 |
| 6CGD_AKN_D_600 | 6% | 36% | 0.247 | 0.823 | 1.28 | 1.18 | 1 | 5 | 13 | 0 | 100% | 0.6 |
| 6VTA_AKN_A_302 | 89% | 35% | 0.055 | 0.975 | 1.58 | 0.98 | 7 | 4 | 0 | 0 | 100% | 1 |
| 4P20_AKN_B_101 | 79% | 20% | 0.06 | 0.943 | 2.43 | 0.99 | 19 | 4 | 2 | 0 | 100% | 1 |
| 8EV6_AKN_1A_3936 | 77% | 23% | 0.072 | 0.953 | 1.94 | 1.27 | 9 | 8 | 3 | 0 | 100% | 1 |
