C2E: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)
C2E is a Ligand Of Interest in 5Y4R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5Y4R_C2E_D_201 | 87% | 2% | 0.102 | 0.975 | 5.16 | 1.6 | 23 | 13 | 0 | 0 | 100% | 1 |
5Y4R_C2E_C_201 | 86% | 2% | 0.107 | 0.977 | 5.17 | 1.55 | 21 | 11 | 3 | 0 | 100% | 1 |
5Y4R_C2E_D_202 | 82% | 2% | 0.106 | 0.961 | 5.2 | 1.57 | 21 | 11 | 0 | 0 | 100% | 1 |
5Y4R_C2E_C_202 | 79% | 2% | 0.108 | 0.955 | 5.2 | 1.57 | 21 | 11 | 4 | 0 | 100% | 1 |
5XLY_C2E_B_201 | 82% | 8% | 0.095 | 0.949 | 3.02 | 1.6 | 15 | 8 | 1 | 0 | 100% | 1 |
8U0I_C2E_A_102 | 100% | 40% | 0.042 | 0.984 | 1.15 | 1.19 | 6 | 6 | 0 | 0 | 100% | 1 |
4RT1_C2E_B_201 | 99% | 17% | 0.054 | 0.982 | 2.38 | 1.24 | 11 | 7 | 0 | 0 | 100% | 1 |
4URG_C2E_A_1241 | 97% | 16% | 0.065 | 0.983 | 2.24 | 1.49 | 10 | 10 | 0 | 0 | 100% | 1 |
2RDE_C2E_B_301 | 97% | 45% | 0.067 | 0.983 | 0.93 | 1.18 | 2 | 6 | 1 | 0 | 100% | 1 |
8WJD_C2E_A_201 | 97% | 57% | 0.055 | 0.97 | 0.99 | 0.68 | 2 | - | 0 | 0 | 100% | 0.42 |