NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 5VWT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VWT_NDP_A_604 | 62% | 13% | 0.18 | 0.972 | 2.42 | 1.59 | 9 | 10 | 1 | 0 | 100% | 1 |
5VWT_NDP_B_603 | 52% | 11% | 0.209 | 0.97 | 2.65 | 1.52 | 9 | 10 | 1 | 0 | 100% | 1 |
5VWT_NDP_C_602 | 27% | 5% | 0.203 | 0.913 | 3.59 | 1.94 | 4 | 12 | 0 | 0 | 65% | 0.4521 |
5VWT_NDP_D_604 | 21% | 5% | 0.229 | 0.902 | 3.38 | 2.09 | 4 | 12 | 0 | 0 | 65% | 0.4521 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |