Ligand validation:5VSD

SAM: S-ADENOSYLMETHIONINE

SAM is a Ligand Of Interest in 5VSD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5VSD_SAM_A_3001	54%	40%	0.138	0.901	0.98	1.33	2	2	0	0	100%	1
5VSD_SAM_B_3001	50%	40%	0.143	0.894	0.92	1.4	1	3	0	0	100%	1
5V9J_SAM_B_1301	86%	33%	0.081	0.948	1.23	1.4	3	4	0	0	100%	1
5TTG_SAM_B_1301	84%	35%	0.082	0.944	1.2	1.35	4	2	0	0	100%	1
5TUZ_SAM_B_3001	81%	42%	0.111	0.963	0.93	1.32	-	3	1	0	100%	1
5VSF_SAM_B_3001	65%	42%	0.112	0.913	0.95	1.29	1	2	1	0	100%	1
2P02_SAM_A_2	100%	41%	0.038	0.988	0.67	1.61	-	3	0	0	100%	1
8XAM_SAM_B_402	100%	44%	0.041	0.984	0.88	1.26	-	3	0	0	100%	1
5LSA_SAM_A_303	100%	33%	0.046	0.986	0.91	1.73	-	4	2	0	100%	1
8QE3_SAM_A_402	99%	62%	0.047	0.984	0.6	0.84	-	2	0	0	100%	1
4IV0_SAM_B_302	99%	37%	0.051	0.986	1.1	1.37	2	3	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.