DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
DUP is a Ligand Of Interest in 5NYZ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5NYZ_DUP_A_201 | 54% | 33% | 0.161 | 0.926 | 1.49 | 1.18 | 3 | 3 | 0 | 0 | 100% | 1 |
5NZ2_DUP_A_201 | 87% | 32% | 0.105 | 0.977 | 1.56 | 1.14 | 3 | 2 | 0 | 0 | 100% | 1 |
3ZF5_DUP_A_777 | 81% | 14% | 0.134 | 0.986 | 1.58 | 2.29 | 2 | 3 | 1 | 0 | 100% | 1 |
5CCT_DUP_A_201 | 72% | 9% | 0.148 | 0.974 | 3.4 | 1.13 | 10 | 2 | 0 | 0 | 100% | 1 |
3ZEZ_DUP_A_1173 | 68% | 30% | 0.15 | 0.961 | 1.59 | 1.19 | 2 | 1 | 0 | 0 | 100% | 1 |
3ZF4_DUP_A_777 | 68% | 30% | 0.154 | 0.965 | 1.6 | 1.2 | 2 | 1 | 0 | 0 | 100% | 1 |
3LOJ_DUP_A_201 | 100% | 17% | 0.029 | 0.995 | 2.23 | 1.42 | 9 | 4 | 2 | 0 | 100% | 1 |
3HZA_DUP_A_201 | 100% | 20% | 0.036 | 0.995 | 2.01 | 1.4 | 6 | 8 | 1 | 0 | 100% | 1 |
5ECT_DUP_A_201 | 100% | 24% | 0.04 | 0.994 | 1.82 | 1.3 | 7 | 4 | 1 | 0 | 100% | 1 |
3EHW_DUP_C_777 | 100% | 25% | 0.039 | 0.991 | 1.72 | 1.37 | 4 | 4 | 4 | 0 | 100% | 1 |
1SIX_DUP_A_170 | 100% | 16% | 0.046 | 0.995 | 2.25 | 1.49 | 7 | 4 | 0 | 0 | 100% | 1 |