NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose
NDG is a Ligand Of Interest in 5KV8 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5KV8_NDG_A_602 | 21% | 16% | 0.144 | 0.81 | 1.93 | 1.7 | 2 | 2 | 3 | 0 | 93% | 1 |
| 5KV8_NDG_B_602 | 19% | 27% | 0.15 | 0.805 | 1.34 | 1.61 | 2 | 3 | 1 | 0 | 93% | 1 |
| 5KV8_NDG_B_603 | 18% | 52% | 0.134 | 0.773 | 0.96 | 0.76 | 1 | - | 1 | 0 | 93% | 1 |
| 5KV8_NDG_A_610 | 15% | 41% | 0.127 | 0.738 | 1.42 | 0.81 | 1 | 1 | 1 | 0 | 93% | 1 |
| 5KV8_NDG_A_601 | 12% | 12% | 0.153 | 0.75 | 2.39 | 1.67 | 2 | 2 | 5 | 0 | 93% | 1 |
| 5KV8_NDG_B_611 | 11% | 41% | 0.133 | 0.71 | 1.4 | 0.84 | 1 | 1 | 2 | 0 | 93% | 1 |
| 5KV8_NDG_A_603 | 10% | 32% | 0.142 | 0.715 | 1.57 | 1.15 | 1 | 2 | 1 | 0 | 93% | 1 |
| 5KV8_NDG_B_601 | 1% | 15% | 0.214 | 0.611 | 1.54 | 2.15 | 1 | 3 | 6 | 0 | 93% | 1 |
| 6PKU_NDG_D_401 | 100% | 42% | 0.021 | 0.994 | 0.87 | 1.27 | - | 3 | 0 | 0 | 100% | 1 |
| 2QFR_NDG_A_450 | 100% | 60% | 0.023 | 0.996 | 0.49 | 0.86 | - | 1 | 3 | 0 | 100% | 1 |
| 2ZUV_NDG_B_2002 | 97% | 51% | 0.036 | 0.982 | 0.59 | 1.14 | - | 2 | 0 | 0 | 100% | 1 |
| 4OCJ_NDG_A_401 | 94% | 61% | 0.042 | 0.978 | 0.55 | 0.75 | - | - | 0 | 0 | 100% | 1 |
| 6X7Y_NDG_A_201 | 94% | 8% | 0.045 | 0.983 | 1.34 | 3.24 | 2 | 4 | 1 | 0 | 100% | 0.5 |














