Ligand validation:5KSB

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5KSB designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KSB_NAG_C_1000	5%	68%	0.254	0.649	0.38	0.86	-	1	0	0	100%	0.9333
5KSB_NAG_B_1000	4%	36%	0.215	0.601	0.41	2.04	-	4	0	0	100%	0.9333
5KSB_NAG_A_1003	4%	65%	0.237	0.601	0.29	1.03	-	3	0	0	100%	0.9333
5KSB_NAG_D_1000	3%	43%	0.246	0.59	0.39	1.78	-	2	0	0	100%	0.9333
4OZF_NAG_A_1000	56%	64%	0.144	0.916	0.3	1.07	-	1	0	0	100%	0.9333
8W84_NAG_C_1000	51%	80%	0.112	0.866	0.25	0.59	-	-	4	0	100%	0.9333
6U3M_NAG_A_1001	44%	79%	0.112	0.838	0.42	0.45	-	-	0	0	100%	0.9333
6MFG_NAG_A_1001	44%	78%	0.108	0.833	0.35	0.54	-	-	0	0	100%	0.9333
7SG2_NAG_A_201	42%	73%	0.19	0.91	0.28	0.74	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333
5U7O_NAG_B_704	100%	88%	0.024	0.989	0.23	0.44	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.