PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5KQU designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5KQU_PLP_A_501 | 67% | 2% | 0.151 | 0.96 | 3.68 | 3.09 | 3 | 8 | 8 | 0 | 100% | 0.9375 |
5KQU_PLP_B_501 | 44% | 8% | 0.229 | 0.959 | 2.93 | 1.71 | 3 | 5 | 4 | 0 | 100% | 0.9375 |
5KQU_PLP_C_501 | 44% | 4% | 0.217 | 0.945 | 3.29 | 2.35 | 3 | 7 | 4 | 0 | 100% | 0.9375 |
5KQU_PLP_F_501 | 41% | 4% | 0.225 | 0.943 | 3.57 | 2.19 | 3 | 7 | 2 | 0 | 100% | 0.9375 |
5KQU_PLP_E_501 | 27% | 3% | 0.271 | 0.919 | 3.56 | 2.69 | 4 | 8 | 9 | 0 | 100% | 0.9375 |
5KQU_PLP_D_501 | 25% | 1% | 0.27 | 0.91 | 3.99 | 3.56 | 6 | 8 | 11 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |