NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 4YFD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4YFD_NAG_A_602 | 37% | 75% | 0.144 | 0.84 | 0.34 | 0.63 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YFD_NAG_B_404 | 33% | 46% | 0.186 | 0.863 | 1.23 | 0.85 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
4YFD_NAG_B_405 | 30% | 57% | 0.207 | 0.87 | 1.09 | 0.58 | 2 | - | 0 | 0 | 100% | 0.9333 |
4YFD_NAG_B_401 | 25% | 70% | 0.2 | 0.838 | 0.4 | 0.74 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YFD_NAG_B_402 | 25% | 46% | 0.193 | 0.826 | 0.96 | 1.12 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
4YFD_NAG_B_403 | 19% | 69% | 0.239 | 0.835 | 0.56 | 0.63 | - | - | 0 | 0 | 100% | 0.9333 |
4YFD_NAG_A_601 | 9% | 87% | 0.286 | 0.782 | 0.28 | 0.42 | - | - | 0 | 0 | 100% | 0.9333 |
5XWT_NAG_B_602 | 24% | 33% | 0.209 | 0.84 | 1.56 | 1.12 | 3 | 2 | 0 | 0 | 100% | 0.9333 |
4Y61_NAG_B_301 | 21% | 78% | 0.276 | 0.888 | 0.3 | 0.59 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |