UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4WLZ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4WLZ_UDP_A_402 | 45% | 33% | 0.198 | 0.932 | 1.09 | 1.54 | 2 | 5 | 0 | 0 | 100% | 1 |
4WLZ_UDP_B_402 | 5% | 32% | 0.346 | 0.759 | 1.12 | 1.55 | 2 | 5 | 0 | 0 | 100% | 1 |
4WMB_UDP_A_402 | 92% | 33% | 0.091 | 0.982 | 1.05 | 1.57 | 1 | 6 | 0 | 0 | 100% | 1 |
4WN2_UDP_A_402 | 84% | 24% | 0.088 | 0.949 | 1.14 | 1.97 | 3 | 10 | 0 | 0 | 100% | 0.6 |
4WMK_UDP_A_402 | 79% | 29% | 0.101 | 0.945 | 1.15 | 1.67 | 3 | 5 | 1 | 0 | 100% | 1 |
4WMI_UDP_A_402 | 76% | 28% | 0.104 | 0.939 | 1.08 | 1.81 | 3 | 8 | 2 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_D_702 | 100% | 67% | 0.032 | 0.995 | 0.59 | 0.69 | - | - | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |