4TNH
DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4TNH designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4TNH_DGD_c_516 | 20% | 39% | 0.26 | 0.876 | 0.91 | 1.44 | 1 | 11 | 0 | 0 | 94% | 0.9394 |
4TNH_DGD_C_515 | 14% | 42% | 0.283 | 0.87 | 0.97 | 1.26 | 2 | 6 | 0 | 0 | 80% | 0.803 |
4TNH_DGD_B_620 | 13% | 42% | 0.301 | 0.86 | 0.92 | 1.33 | 1 | 8 | 0 | 0 | 88% | 0.8788 |
4TNH_DGD_C_516 | 11% | 39% | 0.285 | 0.819 | 0.91 | 1.44 | 2 | 12 | 0 | 0 | 94% | 0.9394 |
4TNH_DGD_c_517 | 8% | 41% | 0.3 | 0.767 | 0.88 | 1.4 | - | 10 | 0 | 0 | 100% | 1 |
4TNH_DGD_b_624 | 7% | 42% | 0.344 | 0.831 | 0.91 | 1.34 | 1 | 6 | 0 | 0 | 88% | 0.8788 |
4TNH_DGD_c_515 | 5% | 42% | 0.405 | 0.858 | 0.96 | 1.27 | 1 | 6 | 0 | 0 | 80% | 0.803 |
4TNH_DGD_C_517 | 3% | 41% | 0.338 | 0.682 | 0.89 | 1.4 | 2 | 10 | 0 | 0 | 100% | 1 |
4TNH_DGD_a_411 | 2% | 40% | 0.389 | 0.7 | 0.92 | 1.4 | 1 | 7 | 0 | 0 | 85% | 0.8485 |
4TNH_DGD_b_601 | 2% | 39% | 0.464 | 0.778 | 1.05 | 1.32 | 3 | 7 | 0 | 0 | 79% | 0.7879 |
4TNH_DGD_B_625 | 0% | 39% | 0.629 | 0.7 | 1.07 | 1.3 | 3 | 7 | 0 | 0 | 79% | 0.7879 |
4TNH_DGD_A_408 | 0% | 40% | 0.556 | 0.573 | 0.92 | 1.41 | - | 8 | 0 | 0 | 85% | 0.8485 |
4TNH_DGD_d_409 | 0% | 41% | 0.744 | 0.7 | 0.93 | 1.34 | 1 | 9 | 0 | 0 | 95% | 0.9545 |
4TNH_DGD_D_409 | 0% | 42% | 0.794 | 0.686 | 0.92 | 1.33 | - | 9 | 0 | 0 | 95% | 0.9545 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
5ZZN_DGD_c_517 | 85% | 45% | 0.09 | 0.966 | 1.05 | 1.06 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
7RF1_DGD_c_519 | 85% | 34% | 0.093 | 0.968 | 1.16 | 1.45 | 6 | 11 | 0 | 0 | 94% | 0.9394 |