PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
PMP is a Ligand Of Interest in 4R5F designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4R5F_PMP_A_404 | 38% | 47% | 0.221 | 0.926 | 0.93 | 1.1 | 1 | 2 | 2 | 0 | 100% | 0.7 |
4HVK_PMP_A_404 | 73% | 7% | 0.128 | 0.955 | 2.5 | 2.3 | 5 | 10 | 1 | 0 | 100% | 0.7 |
2QB3_PMP_A_700 | 99% | 24% | 0.05 | 0.985 | 2.08 | 1.04 | 4 | - | 0 | 0 | 100% | 0.4 |
8TN3_PMP_B_501 | 99% | 52% | 0.058 | 0.99 | 0.87 | 0.99 | - | 1 | 0 | 0 | 100% | 1 |
8PNX_PMP_A_301 | 99% | 55% | 0.053 | 0.984 | 0.56 | 1.16 | - | 2 | 0 | 0 | 100% | 1 |
6HBV_PMP_A_502 | 99% | 16% | 0.061 | 0.992 | 2.55 | 1.19 | 3 | 2 | 0 | 0 | 100% | 0.5 |
2QBT_PMP_A_700 | 99% | 49% | 0.062 | 0.99 | 0.88 | 1.09 | 1 | 1 | 0 | 0 | 100% | 0.75 |