KDG: 2-KETO-3-DEOXYGLUCONATE
KDG is a Ligand Of Interest in 4ONV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4ONV_KDG_D_409 | 24% | 49% | 0.212 | 0.842 | 0.91 | 1.06 | - | 1 | 2 | 0 | 100% | 0.9167 |
4ONV_KDG_B_409 | 22% | 41% | 0.216 | 0.83 | 0.86 | 1.42 | - | 3 | 5 | 0 | 100% | 0.9167 |
4ONV_KDG_C_408 | 10% | 38% | 0.294 | 0.797 | 0.8 | 1.6 | - | 2 | 9 | 0 | 100% | 0.4583 |
4ONV_KDG_A_406 | 8% | 43% | 0.327 | 0.796 | 0.9 | 1.3 | - | 1 | 11 | 0 | 100% | 0.4583 |
1V1A_KDG_A_1302 | 79% | 42% | 0.107 | 0.953 | 0.98 | 1.25 | - | 2 | 0 | 0 | 100% | 1 |
4KPL_KDG_H_501 | 79% | 39% | 0.107 | 0.952 | 0.88 | 1.5 | - | 3 | 0 | 0 | 100% | 1 |
2VAR_KDG_A_1313 | 78% | 41% | 0.12 | 0.962 | 1.13 | 1.16 | 1 | 1 | 4 | 0 | 100% | 0.5 |
3P93_KDG_H_407 | 73% | 38% | 0.108 | 0.936 | 0.89 | 1.53 | 1 | 3 | 0 | 0 | 100% | 1 |
2QJN_KDG_A_2001 | 58% | 47% | 0.129 | 0.907 | 0.91 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |