AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 4NDF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4NDF_AMP_A_401 | 88% | 41% | 0.1 | 0.976 | 0.85 | 1.41 | 1 | 3 | 0 | 0 | 100% | 1 |
4NDF_AMP_B_401 | 74% | 42% | 0.115 | 0.945 | 0.88 | 1.37 | 1 | 3 | 1 | 0 | 100% | 1 |
6CVQ_AMP_B_401 | 98% | 53% | 0.067 | 0.986 | 0.84 | 0.97 | - | - | 1 | 0 | 100% | 1 |
4NDH_AMP_B_401 | 92% | 38% | 0.084 | 0.974 | 1.07 | 1.35 | 2 | 3 | 0 | 0 | 100% | 1 |
4NDI_AMP_A_401 | 91% | 38% | 0.092 | 0.979 | 0.89 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
6CVP_AMP_A_401 | 88% | 44% | 0.097 | 0.972 | 1.1 | 1.08 | 2 | 3 | 0 | 0 | 100% | 1 |
6CVR_AMP_B_401 | 86% | 49% | 0.093 | 0.961 | 0.83 | 1.13 | 1 | 2 | 0 | 0 | 100% | 1 |
7SNB_AMP_A_303 | 100% | 55% | 0.045 | 0.993 | 0.75 | 0.98 | - | 1 | 0 | 0 | 100% | 0.783 |
3CLT_AMP_C_1262 | 100% | 40% | 0.046 | 0.987 | 0.91 | 1.4 | 1 | 4 | 0 | 0 | 100% | 1 |
3CLR_AMP_C_1262 | 100% | 41% | 0.048 | 0.989 | 1.01 | 1.29 | 1 | 3 | 0 | 0 | 100% | 1 |
5K99_AMP_D_101 | 99% | 36% | 0.05 | 0.988 | 1.13 | 1.4 | 2 | 1 | 0 | 0 | 100% | 0.9278 |
5NRH_AMP_B_700 | 99% | 34% | 0.051 | 0.989 | 1.23 | 1.39 | 3 | 2 | 0 | 0 | 100% | 1 |