Ligand validation:4N4Y


HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 4N4Y designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4N4Y_HEM_A_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4N4Y_HEM_A_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4N4Y_HEM_A_602Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4N4Y_HEM_A_602 81% 6% 0.123 0.9742.85 2.18 19 1240100%1
8HUA_HEM_A_602 97% 18% 0.072 0.9891.48 2.01 7 1100100%1
4G7S_HEM_A_602 96% 4% 0.075 0.9872.31 3.3 14 24 00100%1
3S8G_HEM_A_800 96% 7% 0.079 0.9912.52 2.36 17 1510100%1
1XME_HEM_A_800 94% 26% 0.079 0.9761.65 1.36 7 510100%1
4FA7_HEM_A_602 92% 13% 0.092 0.9831.99 1.97 10 1100100%1
1FHF_HEM_A_350 100% 17% 0.021 0.9971.8 1.82 12 340100%1
1HBH_HEM_A_144 100% 11% 0.019 0.9971.48 2.62 5 1250100%1
2D2C_HEM_A_301 100% 9% 0.024 0.9992.2 2.28 9 1240100%1
3EJD_HEM_B_405 100% 17% 0.018 0.9981.9 1.69 6 820100%1
3EJE_HEM_B_405 100% 18% 0.022 0.9971.91 1.6 8 810100%1