4DKO | pdb_00004dko


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 4DKO designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4DKO_NAG_C_503 85% 59% 0.058 0.9620.45 0.94 - 100100%1
4DKO_NAG_A_503 71% 63% 0.075 0.9340.5 0.74 - -00100%1
4DKO_NAG_A_509 66% 67% 0.085 0.9270.51 0.59 - -00100%1
4DKO_NAG_A_504 48% 66% 0.105 0.8730.5 0.61 - -00100%1
4DKO_NAG_A_505 47% 63% 0.118 0.8920.49 0.73 - -00100%1
4DKO_NAG_A_501 43% 66% 0.108 0.8540.54 0.59 - -00100%1
4DKO_NAG_A_508 41% 64% 0.119 0.8610.55 0.64 - -00100%1
4DKO_NAG_A_506 31% 59% 0.141 0.850.48 0.91 - -00100%1
4DKO_NAG_C_501 26% 64% 0.128 0.7980.51 0.68 - -00100%1
4DKO_NAG_C_509 25% 63% 0.123 0.7820.49 0.74 - -00100%1
4DKO_NAG_C_505 21% 56% 0.142 0.7920.5 1 - 100100%1
4DKO_NAG_C_511 13% 62% 0.155 0.7550.48 0.77 - -10100%1
4DKO_NAG_C_506 13% 65% 0.153 0.7460.51 0.64 - -00100%1
4DKO_NAG_A_507 12% 64% 0.173 0.7680.51 0.66 - -00100%1
4DKO_NAG_A_510 11% 64% 0.147 0.7170.53 0.66 - -00100%1
4DKO_NAG_C_504 7% 64% 0.16 0.6820.53 0.67 - -00100%1
4DKO_NAG_C_507 4% 65% 0.167 0.6250.51 0.65 - -00100%1
4DKO_NAG_A_511 1% 64% 0.181 0.539 0.48 0.69 - -20100%1
4DKO_NAG_C_508 1% 62% 0.152 0.446 0.53 0.75 - -00100%1
4DKO_NAG_C_502 1% 64% 0.191 0.512 0.51 0.68 - -00100%1
4DKO_NAG_C_510 1% 64% 0.203 0.524 0.48 0.71 - -00100%1
4DKO_NAG_A_502 0% 67% 0.222 0.245 0.52 0.56 - -00100%1
5F9W_NAG_G_505 100% 84% 0.022 0.9940.21 0.5 - -00100%1
4YDL_NAG_A_503 99% 74% 0.028 0.9910.38 0.51 - -00100%1
7SX7_NAG_G_502 98% 57% 0.032 0.9860.67 0.78 - -00100%1
7SX6_NAG_A_507 98% 88% 0.035 0.9880.17 0.45 - -00100%1
4DKP_NAG_C_503 90% 59% 0.05 0.9690.44 0.92 - 100100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1