4D65 | pdb_00004d65


LDA: LAURYL DIMETHYLAMINE-N-OXIDE

Help
LDA is a Ligand Of Interest in 4D65 designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4D65_LDA_B_1346 77% 51% 0.095 0.9391.14 0.68 1 -00100%1
4D65_LDA_A_1347 72% 49% 0.093 0.921.11 0.77 1 -10100%1
4D65_LDA_A_1345 62% 46% 0.116 0.9091.1 0.91 1 100100%1
4D65_LDA_C_1356 57% 49% 0.141 0.9191.31 0.57 1 -00100%1
4D65_LDA_A_1346 54% 35% 0.127 0.8931.4 1.07 1 240100%1
4D65_LDA_B_1353 53% 44% 0.146 0.9091.23 0.87 1 120100%1
4D65_LDA_A_1373 53% 26% 0.136 0.8962.49 0.51 2 -30100%1
4D65_LDA_A_1367 51% 48% 0.129 0.8830.94 0.98 1 -40100%1
4D65_LDA_B_1359 50% 50% 0.139 0.891.24 0.6 1 -20100%1
4D65_LDA_A_1357 49% 51% 0.137 0.8851.22 0.57 2 -70100%1
4D65_LDA_A_1348 49% 57% 0.145 0.8931.1 0.44 1 -30100%1
4D65_LDA_B_1345 49% 51% 0.136 0.8831.27 0.54 1 -40100%1
4D65_LDA_C_1347 49% 12% 0.137 0.8840.96 2.89 2 330100%1
4D65_LDA_B_1351 47% 41% 0.145 0.8851.18 1 1 120100%1
4D65_LDA_B_1500 45% 50% 0.15 0.8831.29 0.58 1 -10100%1
4D65_LDA_E_1352 42% 40% 0.157 0.8761.35 0.92 2 -10100%1
4D65_LDA_A_1371 41% 52% 0.157 0.8751.22 0.54 1 -10100%1
4D65_LDA_B_1501 41% 51% 0.16 0.8751.16 0.63 1 -30100%1
4D65_LDA_A_1354 39% 43% 0.153 0.8591.2 0.91 1 -90100%1
4D65_LDA_B_1347 38% 48% 0.16 0.8611.14 0.77 1 -20100%1
4D65_LDA_A_1369 37% 50% 0.154 0.8531.26 0.59 1 -20100%1
4D65_LDA_B_1348 37% 37% 0.179 0.881.33 1.05 1 130100%1
4D65_LDA_C_1346 37% 50% 0.164 0.8631.2 0.65 1 -10100%1
4D65_LDA_C_1358 37% 74% 0.148 0.9140.33 0.56 - -1063%1
4D65_LDA_A_1344 36% 44% 0.175 0.8691.35 0.75 1 -00100%1
4D65_LDA_A_1370 35% 38% 0.176 0.8681.24 1.08 1 120100%1
4D65_LDA_A_1379 35% 50% 0.154 0.8421.24 0.63 1 -50100%1
4D65_LDA_B_1355 35% 52% 0.145 0.8321.25 0.53 1 -10100%1
4D65_LDA_A_1376 34% 50% 0.192 0.8791.25 0.59 2 -20100%1
4D65_LDA_A_1368 31% 38% 0.161 0.8291.05 1.26 2 250100%1
4D65_LDA_F_1348 29% 51% 0.182 0.8461.05 0.76 1 -30100%1
4D65_LDA_B_1357 29% 74% 0.133 0.8740.33 0.55 - -0056%1
4D65_LDA_D_1352 29% 49% 0.173 0.8341.11 0.77 1 -40100%1
4D65_LDA_B_1350 29% 43% 0.186 0.8471.31 0.81 2 -10100%1
4D65_LDA_A_1372 29% 49% 0.19 0.851.25 0.65 1 -20100%1
4D65_LDA_F_1345 28% 49% 0.18 0.8391.2 0.67 1 -20100%1
4D65_LDA_D_1345 28% 52% 0.173 0.8311.2 0.58 1 -20100%1
4D65_LDA_B_1354 28% 50% 0.19 0.8461.2 0.64 1 -20100%1
4D65_LDA_D_1361 26% 74% 0.163 0.90.28 0.61 - -0050%1
4D65_LDA_F_1347 26% 51% 0.18 0.8251.15 0.63 1 -30100%1
4D65_LDA_C_1345 26% 40% 0.189 0.8331.4 0.84 1 -10100%1
4D65_LDA_B_1352 25% 41% 0.177 0.8191.28 0.91 1 -00100%1
4D65_LDA_B_1344 25% 47% 0.165 0.8741.52 0.46 1 -1063%1
4D65_LDA_A_1361 25% 44% 0.193 0.8331.19 0.89 1 100100%1
4D65_LDA_A_1359 25% 76% 0.186 0.9170.31 0.53 - -1050%1
4D65_LDA_E_1344 24% 47% 0.211 0.851.13 0.84 1 -40100%1
4D65_LDA_D_1347 24% 35% 0.2 0.8381.24 1.23 1 210100%1
4D65_LDA_A_1385 24% 51% 0.192 0.8291.14 0.67 1 -40100%1
4D65_LDA_C_1353 24% 54% 0.183 0.8161.15 0.5 1 -20100%1
4D65_LDA_D_1344 24% 43% 0.196 0.831.29 0.84 1 -30100%1
4D65_LDA_B_1349 24% 48% 0.167 0.8311.47 0.49 1 -1081%1
4D65_LDA_F_1354 23% 54% 0.194 0.8211.05 0.6 1 -10100%1
4D65_LDA_F_1346 21% 47% 0.187 0.8041.24 0.71 1 -40100%1
4D65_LDA_A_1365 21% 50% 0.199 0.8161.26 0.6 2 -10100%1
4D65_LDA_F_1351 21% 34% 0.224 0.8411.47 1.08 1 160100%1
4D65_LDA_A_1374 20% 73% 0.15 0.850.32 0.58 - -4050%1
4D65_LDA_B_1360 20% 50% 0.181 0.791.12 0.7 2 -20100%1
4D65_LDA_A_1500 20% 69% 0.158 0.8220.41 0.64 - -0069%1
4D65_LDA_C_1357 20% 39% 0.195 0.8041.25 1.05 1 -10100%1
4D65_LDA_D_1353 20% 41% 0.209 0.8191.17 1.03 2 210100%1
4D65_LDA_A_1360 20% 26% 0.208 0.8621.35 1.52 1 20075%1
4D65_LDA_F_1500 20% 43% 0.184 0.8351.49 0.65 2 -2075%1
4D65_LDA_A_1353 18% 49% 0.188 0.8351.46 0.44 2 -1069%1
4D65_LDA_A_1387 17% 33% 0.214 0.8031.12 1.43 1 290100%1
4D65_LDA_A_1352 17% 52% 0.184 0.8131.37 0.42 1 -0075%1
4D65_LDA_F_1504 17% 6% 0.186 0.7680.98 3.78 1 750100%1
4D65_LDA_C_1352 17% 53% 0.165 0.8031.38 0.37 1 -6069%1
4D65_LDA_A_1378 16% 74% 0.181 0.8380.34 0.56 - -0056%1
4D65_LDA_B_1363 16% 49% 0.183 0.7571.21 0.68 1 -30100%1
4D65_LDA_B_1374 16% 43% 0.188 0.7621.09 1.03 2 130100%1
4D65_LDA_E_1350 16% 54% 0.204 0.7771.13 0.53 1 -00100%1
4D65_LDA_F_1357 15% 45% 0.229 0.8041.25 0.8 1 -20100%1
4D65_LDA_C_1351 15% 52% 0.195 0.7661.18 0.58 1 -30100%1
4D65_LDA_F_1350 15% 48% 0.206 0.7771.2 0.72 2 -10100%1
4D65_LDA_C_1501 15% 39% 0.168 0.7911.34 0.96 1 16069%1
4D65_LDA_A_1377 15% 53% 0.228 0.7971.15 0.55 1 -10100%1
4D65_LDA_B_1365 15% 51% 0.221 0.7891.15 0.65 1 -20100%1
4D65_LDA_C_1362 14% 49% 0.214 0.7761.19 0.71 1 -00100%1
4D65_LDA_B_1356 14% 55% 0.237 0.8011.15 0.46 1 -10100%1
4D65_LDA_E_1356 14% 54% 0.229 0.791.08 0.6 1 -30100%1
4D65_LDA_A_1384 14% 51% 0.223 0.7831.16 0.63 1 -30100%1
4D65_LDA_E_1349 14% 52% 0.212 0.7911.15 0.62 1 -2088%1
4D65_LDA_A_1366 13% 47% 0.211 0.7651.09 0.86 1 -30100%1
4D65_LDA_D_1348 13% 44% 0.213 0.7671.2 0.87 1 -10100%1
4D65_LDA_A_1358 13% 26% 0.194 0.7462.5 0.5 2 -30100%1
4D65_LDA_F_1349 13% 47% 0.239 0.7951.15 0.8 1 120100%1
4D65_LDA_E_1353 13% 62% 0.184 0.8040.37 0.93 - -0063%1
4D65_LDA_B_1367 13% 49% 0.202 0.7521.17 0.73 1 -20100%1
4D65_LDA_B_1364 13% 52% 0.228 0.7791.25 0.5 1 -00100%1
4D65_LDA_C_1361 13% 51% 0.211 0.7591.24 0.57 1 -20100%1
4D65_LDA_E_1348 13% 46% 0.214 0.7621.21 0.8 1 -10100%1
4D65_LDA_B_1371 13% 35% 0.228 0.7751.01 1.43 2 380100%1
4D65_LDA_B_1369 12% 48% 0.207 0.750.88 1.03 1 120100%1
4D65_LDA_B_1358 12% 51% 0.216 0.8021.41 0.42 1 -0075%1
4D65_LDA_A_1383 11% 50% 0.25 0.7861.2 0.65 1 -50100%1
4D65_LDA_B_1362 11% 75% 0.159 0.7620.39 0.47 - -1056%1
4D65_LDA_A_1355 11% 48% 0.169 0.6910.92 0.99 1 150100%1
4D65_LDA_F_1501 11% 50% 0.223 0.7491.14 0.71 1 -20100%1
4D65_LDA_A_1386 11% 47% 0.22 0.7451.26 0.7 2 -40100%1
4D65_LDA_D_1350 11% 48% 0.228 0.8111.51 0.43 2 -1069%1
4D65_LDA_F_1344 10% 46% 0.222 0.7421.04 0.95 1 -70100%1
4D65_LDA_B_1373 10% 53% 0.26 0.7831.11 0.61 1 -70100%1
4D65_LDA_D_1360 10% 42% 0.246 0.7641.08 1.08 1 120100%1
4D65_LDA_E_1355 10% 49% 0.188 0.6991.17 0.72 2 -10100%1
4D65_LDA_D_1346 10% 54% 0.216 0.7281.15 0.51 1 -60100%1
4D65_LDA_A_1362 10% 45% 0.216 0.7261.32 0.73 2 -10100%1
4D65_LDA_E_1357 10% 45% 0.253 0.7661.19 0.86 2 -30100%1
4D65_LDA_F_1361 9% 51% 0.224 0.7291.17 0.63 2 -00100%1
4D65_LDA_F_1353 9% 55% 0.201 0.6991.08 0.52 1 -10100%1
4D65_LDA_A_1382 9% 48% 0.241 0.7411.23 0.71 1 -20100%1
4D65_LDA_E_1347 9% 33% 0.21 0.7651.15 1.42 1 14069%1
4D65_LDA_A_1364 9% 74% 0.217 0.7950.34 0.54 - -0056%1
4D65_LDA_F_1359 8% 44% 0.227 0.7211.12 0.97 1 140100%1
4D65_LDA_C_1344 8% 51% 0.232 0.7261.26 0.54 1 -10100%1
4D65_LDA_F_1366 8% 49% 0.225 0.7171.03 0.86 1 -50100%1
4D65_LDA_B_1368 8% 49% 0.229 0.7741.45 0.47 1 -1069%1
4D65_LDA_F_1364 8% 45% 0.229 0.7131.16 0.87 1 -20100%1
4D65_LDA_B_1361 8% 73% 0.21 0.7720.38 0.53 - -1056%1
4D65_LDA_D_1363 8% 42% 0.228 0.7061.09 1.07 1 200100%1
4D65_LDA_C_1355 7% 36% 0.157 0.7091.32 1.11 1 13056%1
4D65_LDA_B_1370 7% 46% 0.21 0.7761.72 0.32 1 -0050%1
4D65_LDA_A_1356 7% 49% 0.213 0.741.55 0.37 1 -1069%1
4D65_LDA_C_1502 7% 74% 0.163 0.7170.36 0.54 - -0050%1
4D65_LDA_F_1502 7% 70% 0.18 0.7110.33 0.67 - -1063%1
4D65_LDA_B_1366 7% 26% 0.257 0.7181.25 1.65 1 450100%1
4D65_LDA_D_1357 6% 49% 0.21 0.6631.23 0.67 1 -50100%1
4D65_LDA_D_1356 6% 55% 0.198 0.6481.16 0.46 1 -50100%1
4D65_LDA_A_1501 6% 43% 0.196 0.7041.63 0.52 1 -0069%1
4D65_LDA_C_1350 6% 50% 0.259 0.7071.24 0.61 1 -00100%1
4D65_LDA_A_1381 6% 53% 0.205 0.6441.18 0.53 1 -00100%1
4D65_LDA_D_1354 5% 39% 0.226 0.6781.04 1.25 1 25088%1
4D65_LDA_C_1348 5% 49% 0.271 0.7581.44 0.47 2 -0069%1
4D65_LDA_D_1355 5% 53% 0.245 0.6711.08 0.61 1 -30100%1
4D65_LDA_F_1355 5% 53% 0.291 0.7781.39 0.34 1 -3069%1
4D65_LDA_A_1349 5% 51% 0.244 0.6661.11 0.7 1 -20100%1
4D65_LDA_F_1352 5% 43% 0.259 0.6821.25 0.86 1 -60100%1
4D65_LDA_C_1360 5% 40% 0.265 0.6871.33 0.91 1 -40100%1
4D65_LDA_F_1365 5% 46% 0.254 0.6691.08 0.91 1 170100%1
4D65_LDA_D_1362 5% 40% 0.241 0.6510.86 1.35 1 140100%1
4D65_LDA_F_1356 4% 50% 0.283 0.751.47 0.4 1 -1069%1
4D65_LDA_C_1354 4% 41% 0.188 0.6421.19 1.02 1 12069%1
4D65_LDA_A_1388 4% 38% 0.224 0.6181.21 1.11 2 160100%1
4D65_LDA_A_1351 4% 48% 0.25 0.6690.85 1.03 - 13088%1
4D65_LDA_F_1363 4% 47% 0.241 0.6361.11 0.85 2 -10100%1
4D65_LDA_A_1363 4% 73% 0.198 0.6690.41 0.52 - -0056%1
4D65_LDA_F_1362 4% 46% 0.23 0.6051.15 0.86 1 -70100%1
4D65_LDA_A_1502 3% 53% 0.228 0.6581.36 0.36 1 -3069%1
4D65_LDA_A_1375 3% 75% 0.268 0.7230.39 0.49 - -3056%1
4D65_LDA_D_1359 3% 75% 0.216 0.6580.38 0.49 - -0050%1
4D65_LDA_E_1351 3% 51% 0.233 0.6381.47 0.37 2 -0069%1
4D65_LDA_F_1503 3% 56% 0.228 0.57 1.06 0.51 1 -00100%1
4D65_LDA_C_1359 2% 33% 0.281 0.6641.58 1 2 -1069%1
4D65_LDA_D_1351 2% 49% 0.314 0.6831.5 0.42 2 -0069%1
4D65_LDA_E_1354 2% 50% 0.302 0.6021.2 0.63 1 -20100%1
4D65_LDA_E_1345 2% 46% 0.258 0.5971.46 0.55 1 -1069%1
4D65_LDA_F_1358 2% 47% 0.245 0.512 1.14 0.82 1 -60100%1
4D65_LDA_A_1350 1% 53% 0.325 0.5831.24 0.49 1 -00100%0.5
4D65_LDA_C_1500 1% 51% 0.26 0.511 1.15 0.63 1 -20100%1
4D65_LDA_B_1372 1% 40% 0.28 0.527 0.78 1.44 - 160100%1
4D65_LDA_E_1346 1% 48% 0.356 0.6651.34 0.58 1 -2069%1
4D65_LDA_D_1358 1% 77% 0.262 0.5960.39 0.44 - -0050%1
4D65_LDA_A_1380 1% 50% 0.23 0.525 1.48 0.38 1 -3069%1
4D65_LDA_C_1349 1% 43% 0.239 0.569 1.88 0.29 1 -0050%1
4D65_LDA_F_1360 1% 55% 0.236 0.434 1.14 0.5 2 -30100%1
4D65_LDA_D_1349 1% 51% 0.268 0.461 1.21 0.61 1 -00100%1
1OJD_LDA_H_601 100% 23% 0.039 0.9962.21 0.92 2 -40100%1
2PRC_LDA_M_701 100% 23% 0.033 0.9872.43 0.69 2 -00100%1
2VQI_LDA_B_1639 99% 25% 0.041 0.9952.49 0.52 2 -30100%1
1T1L_LDA_A_428 98% 17% 0.064 0.9931.9 1.63 1 380100%1
2R4N_LDA_B_502 97% 17% 0.065 0.9882.11 1.41 2 3120100%1