UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4CJ8 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4CJ8_UDP_D_1237 | 63% | 27% | 0.096 | 0.889 | 1.18 | 1.65 | 2 | 6 | 11 | 0 | 100% | 1 |
| 4CJ8_UDP_K_1237 | 61% | 27% | 0.098 | 0.884 | 1.17 | 1.64 | 2 | 6 | 4 | 0 | 100% | 1 |
| 4CJ8_UDP_I_1237 | 49% | 28% | 0.114 | 0.857 | 1.18 | 1.6 | 2 | 6 | 2 | 0 | 100% | 1 |
| 4CJ8_UDP_M_1246 | 48% | 27% | 0.136 | 0.877 | 1.18 | 1.63 | 4 | 6 | 4 | 0 | 100% | 1 |
| 4CJ8_UDP_C_1237 | 43% | 27% | 0.103 | 0.824 | 1.18 | 1.64 | 3 | 6 | 5 | 0 | 100% | 1 |
| 4CJ8_UDP_N_1244 | 40% | 27% | 0.114 | 0.824 | 1.18 | 1.65 | 2 | 6 | 18 | 0 | 100% | 1 |
| 4CJ8_UDP_J_1237 | 37% | 27% | 0.118 | 0.815 | 1.21 | 1.61 | 3 | 6 | 2 | 0 | 100% | 1 |
| 4CJ8_UDP_B_1237 | 35% | 28% | 0.143 | 0.832 | 1.19 | 1.6 | 2 | 6 | 5 | 0 | 100% | 1 |
| 4CJ8_UDP_L_1237 | 35% | 28% | 0.117 | 0.801 | 1.2 | 1.6 | 3 | 6 | 2 | 0 | 100% | 1 |
| 4CJ8_UDP_A_1237 | 23% | 28% | 0.146 | 0.769 | 1.17 | 1.63 | 3 | 6 | 4 | 0 | 100% | 1 |
| 4CJC_UDP_B_1239 | 33% | 21% | 0.122 | 0.797 | 1.34 | 1.85 | 4 | 8 | 2 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |














