UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4CDR designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4CDR_UDP_E_1001 | 87% | 24% | 0.111 | 0.982 | 1.03 | 2.05 | 1 | 7 | 0 | 0 | 100% | 1 |
4CDR_UDP_F_1001 | 79% | 26% | 0.132 | 0.977 | 1.16 | 1.8 | 2 | 9 | 0 | 0 | 100% | 1 |
4CDR_UDP_G_1001 | 79% | 29% | 0.133 | 0.978 | 1.06 | 1.77 | 1 | 10 | 0 | 0 | 100% | 1 |
4CDR_UDP_H_1001 | 76% | 24% | 0.138 | 0.976 | 1.31 | 1.81 | 3 | 7 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |