NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 3QYL designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3QYL_NDP_A_161 | 97% | 39% | 0.063 | 0.98 | 1.26 | 1.13 | 5 | 3 | 3 | 0 | 100% | 1 |
3DAU_NDP_A_202 | 97% | 26% | 0.064 | 0.981 | 1.36 | 1.62 | 5 | 9 | 1 | 0 | 100% | 1 |
5W3Q_NDP_A_201 | 96% | 68% | 0.069 | 0.977 | 0.56 | 0.66 | - | 1 | 1 | 0 | 100% | 1 |
3QYO_NDP_A_1160 | 95% | 35% | 0.077 | 0.981 | 1.26 | 1.28 | 3 | 4 | 1 | 0 | 100% | 1 |
3R33_NDP_A_1160 | 92% | 35% | 0.084 | 0.976 | 1.37 | 1.21 | 5 | 3 | 3 | 0 | 100% | 1 |
6XG5_NDP_A_301 | 88% | 61% | 0.098 | 0.972 | 0.65 | 0.82 | 1 | 1 | 1 | 0 | 100% | 1 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |