DNB: (2S,3S,4R,5R)-2-(3,4-diaminophenyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol
DNB is a Ligand Of Interest in 3MKN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3MKN_DNB_A_502 | 40% | 18% | 0.164 | 0.876 | 1.19 | 2.33 | 2 | 5 | 1 | 0 | 100% | 1 |
3MKN_DNB_D_502 | 23% | 14% | 0.217 | 0.837 | 1.25 | 2.61 | 3 | 9 | 1 | 0 | 100% | 1 |
3MKN_DNB_B_502 | 7% | 20% | 0.237 | 0.689 | 1.16 | 2.19 | 2 | 5 | 0 | 0 | 100% | 1 |
3MKN_DNB_C_502 | 3% | 26% | 0.297 | 0.613 | 1.14 | 1.86 | 1 | 4 | 0 | 0 | 100% | 1 |
3G5I_DNB_A_502 | 50% | 30% | 0.144 | 0.904 | 0.99 | 1.8 | - | 5 | 0 | 0 | 94% | 0.9412 |