ADP: ADENOSINE-5'-DIPHOSPHATE
ADP is a Ligand Of Interest in 3GVI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3GVI_ADP_A_401 | 95% | 41% | 0.074 | 0.979 | 0.86 | 1.44 | - | 4 | 0 | 0 | 100% | 1 |
3GVI_ADP_C_401 | 92% | 40% | 0.085 | 0.974 | 0.94 | 1.39 | 1 | 4 | 0 | 0 | 100% | 1 |
3GVI_ADP_B_401 | 88% | 36% | 0.089 | 0.964 | 1 | 1.52 | 2 | 4 | 1 | 0 | 100% | 1 |
3GVI_ADP_D_401 | 88% | 37% | 0.094 | 0.969 | 0.91 | 1.55 | - | 4 | 0 | 0 | 100% | 1 |
3GVI_ADP_F_401 | 86% | 34% | 0.095 | 0.963 | 1.15 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
3GVI_ADP_E_401 | 82% | 44% | 0.106 | 0.961 | 0.87 | 1.28 | 1 | 3 | 0 | 0 | 100% | 1 |
3KB1_ADP_A_301 | 100% | 22% | 0.021 | 0.996 | 2.06 | 1.21 | 6 | 4 | 1 | 0 | 100% | 1 |
5GZA_ADP_A_401 | 100% | 2% | 0.019 | 0.997 | 3.36 | 3.39 | 13 | 11 | 1 | 0 | 100% | 1 |
5KHW_ADP_A_1201 | 100% | 41% | 0.023 | 0.995 | 1.1 | 1.2 | 1 | 2 | 0 | 0 | 100% | 1 |
8VZA_ADP_A_603 | 100% | 37% | 0.024 | 0.995 | 0.96 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
1PHP_ADP_A_396 | 100% | 24% | 0.026 | 0.995 | 1.29 | 1.8 | 3 | 11 | 1 | 0 | 100% | 1 |