GTP: GUANOSINE-5'-TRIPHOSPHATE
GTP is a Ligand Of Interest in 3EK5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3EK5_GTP_E_2002 | 45% | 22% | 0.162 | 0.895 | 1.35 | 1.9 | 3 | 8 | 1 | 0 | 100% | 1 |
3EK5_GTP_E_2001 | 31% | 22% | 0.216 | 0.883 | 1.19 | 2.01 | 2 | 11 | 4 | 0 | 100% | 1 |
3EK5_GTP_E_2003 | 30% | 21% | 0.215 | 0.88 | 1.11 | 2.17 | 1 | 8 | 1 | 0 | 100% | 1 |
3EK5_GTP_E_2004 | 22% | 19% | 0.247 | 0.865 | 1.61 | 1.81 | 3 | 7 | 3 | 0 | 100% | 1 |
3EK5_GTP_E_2005 | 19% | 38% | 0.229 | 0.82 | 1.11 | 1.3 | 1 | 3 | 2 | 0 | 100% | 1 |
3EK5_GTP_E_2006 | 19% | 30% | 0.235 | 0.826 | 1.25 | 1.55 | 2 | 6 | 4 | 0 | 100% | 1 |
1PLK_GTP_A_167 | 100% | 37% | 0.036 | 0.997 | 1.16 | 1.29 | 3 | 3 | 3 | 0 | 100% | 1 |
1O3Y_GTP_B_1001 | 100% | 43% | 0.046 | 0.991 | 1 | 1.19 | 1 | 3 | 0 | 0 | 100% | 1 |
1QRA_GTP_A_167 | 100% | 1% | 0.044 | 0.988 | 4.3 | 3.51 | 11 | 12 | 0 | 0 | 100% | 1 |
4GNQ_GTP_A_701 | 100% | 50% | 0.045 | 0.989 | 0.91 | 1 | 1 | 1 | 0 | 0 | 100% | 1 |
4GNM_GTP_A_701 | 100% | 38% | 0.043 | 0.986 | 0.95 | 1.46 | 1 | 5 | 1 | 0 | 100% | 1 |