U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 3DXG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3DXG_U5P_A_126 | 65% | 32% | 0.1 | 0.901 | 1.02 | 1.68 | 2 | 4 | 0 | 0 | 100% | 1 |
3DXG_U5P_A_125 | 63% | 38% | 0.092 | 0.885 | 1.03 | 1.4 | 1 | 5 | 0 | 0 | 100% | 1 |
3DXG_U5P_B_125 | 54% | 30% | 0.124 | 0.886 | 1.07 | 1.68 | 1 | 5 | 0 | 0 | 100% | 1 |
3JW1_U5P_B_201 | 41% | 25% | 0.14 | 0.854 | 1.14 | 1.9 | 2 | 5 | 0 | 0 | 100% | 0.8929 |
6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
2E6Y_U5P_B_302 | 100% | 49% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |
6ZWY_U5P_A_501 | 100% | 44% | 0.048 | 0.994 | 0.99 | 1.17 | 1 | 1 | 0 | 0 | 100% | 1 |
3EWY_U5P_A_481 | 99% | 22% | 0.05 | 0.986 | 1.81 | 1.47 | 4 | 2 | 0 | 0 | 100% | 1 |
2V30_U5P_A_1480 | 99% | 33% | 0.06 | 0.987 | 1.12 | 1.52 | 3 | 7 | 1 | 0 | 100% | 1 |