AP5: BIS(ADENOSINE)-5'-PENTAPHOSPHATE
AP5 is a Ligand Of Interest in 3DL0 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3DL0_AP5_B_218 | 98% | 37% | 0.059 | 0.979 | 1.05 | 1.4 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3DL0_AP5_A_218 | 97% | 39% | 0.061 | 0.977 | 0.99 | 1.38 | 1 | 5 | 0 | 0 | 100% | 1 |
| 4MKF_AP5_A_303 | 99% | 28% | 0.06 | 0.988 | 1.35 | 1.55 | 6 | 8 | 0 | 0 | 100% | 1 |
| 5X6I_AP5_A_303 | 95% | 37% | 0.08 | 0.986 | 1.02 | 1.44 | 2 | 9 | 2 | 0 | 100% | 1 |
| 2EU8_AP5_A_1218 | 93% | 27% | 0.075 | 0.971 | 1.14 | 1.78 | 6 | 10 | 3 | 0 | 100% | 1 |
| 1P3J_AP5_A_220 | 90% | 27% | 0.093 | 0.976 | 1.14 | 1.77 | 5 | 10 | 1 | 0 | 100% | 1 |
| 2OO7_AP5_A_1218 | 90% | 27% | 0.092 | 0.973 | 1.13 | 1.78 | 5 | 10 | 0 | 0 | 100% | 1 |
| 3AKY_AP5_A_301 | 99% | 23% | 0.057 | 0.991 | 1.42 | 1.76 | 8 | 9 | 0 | 0 | 100% | 1 |
| 3BE4_AP5_A_219 | 99% | 10% | 0.059 | 0.991 | 2.08 | 2.2 | 10 | 13 | 1 | 0 | 100% | 1 |
| 4MKG_AP5_A_303 | 99% | 48% | 0.06 | 0.988 | 0.96 | 1.03 | 3 | 3 | 0 | 0 | 100% | 1 |
| 1AKY_AP5_A_301 | 98% | 35% | 0.059 | 0.985 | 1.12 | 1.42 | 4 | 6 | 0 | 0 | 100% | 1 |
| 2AKY_AP5_A_301 | 98% | 29% | 0.062 | 0.988 | 1.4 | 1.46 | 10 | 6 | 0 | 0 | 100% | 1 |
