CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
CAP is a Ligand Of Interest in 2VDI designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2VDI_CAP_H_1477 | 76% | 48% | 0.079 | 0.959 | 0.9 | 1.01 | - | 2 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_C_1477 | 75% | 49% | 0.086 | 0.967 | 0.83 | 1 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_E_1477 | 75% | 48% | 0.08 | 0.956 | 0.84 | 1.07 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_D_1477 | 73% | 49% | 0.081 | 0.953 | 0.81 | 1.05 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_F_1477 | 73% | 48% | 0.09 | 0.967 | 0.84 | 1.08 | - | 3 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_G_1477 | 70% | 46% | 0.092 | 0.955 | 0.8 | 1.2 | - | 3 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_B_1477 | 67% | 43% | 0.099 | 0.953 | 0.93 | 1.18 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDI_CAP_A_1477 | 60% | 50% | 0.105 | 0.932 | 0.84 | 0.95 | - | 1 | 0 | 0 | 100% | 1 |
| 1UW9_CAP_O_1476 | 98% | 27% | 0.032 | 0.991 | 1.64 | 1.33 | 2 | 3 | 0 | 0 | 100% | 1 |
| 2V6A_CAP_B_1477 | 97% | 48% | 0.037 | 0.989 | 0.96 | 0.95 | - | 1 | 0 | 0 | 100% | 1 |
| 2V68_CAP_H_477 | 95% | 49% | 0.043 | 0.984 | 0.86 | 0.98 | - | 1 | 0 | 0 | 100% | 1 |
| 2V67_CAP_F_477 | 95% | 49% | 0.042 | 0.982 | 0.88 | 0.97 | - | 1 | 0 | 0 | 100% | 1 |
| 2VDH_CAP_H_1477 | 94% | 50% | 0.046 | 0.984 | 0.96 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |
| 5IU0_CAP_B_502 | 100% | 45% | 0.013 | 0.999 | 0.89 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |
| 5MZ2_CAP_B_902 | 100% | 42% | 0.013 | 0.998 | 0.84 | 1.32 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1BWV_CAP_A_491 | 100% | 36% | 0.014 | 0.998 | 1.05 | 1.43 | - | 4 | 1 | 0 | 100% | 1 |
| 5N9Z_CAP_G_502 | 100% | 42% | 0.015 | 0.998 | 0.9 | 1.26 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5OYA_CAP_C_502 | 100% | 48% | 0.017 | 0.998 | 0.92 | 1 | - | 1 | 0 | 0 | 100% | 1 |
