Ligand validation:2O01

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 2O01 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2O01_CLA_B_1209	81%	5%	0.056	0.981	2.35	2.8	16	26	50	2	85%	1
2O01_CLA_A_1107	80%	4%	0.061	0.976	2.42	3.03	17	31	25	2	88%	1
2O01_CLA_B_1215	80%	5%	0.056	0.985	2.4	2.95	16	34	29	1	80%	1
2O01_CLA_B_1138	79%	6%	0.062	0.978	2.38	2.63	17	29	32	2	86%	1
2O01_CLA_B_1218	79%	3%	0.054	0.981	2.77	3.03	23	27	55	1	78%	1
2O01_CLA_A_1136	78%	5%	0.064	0.982	2.31	3.04	15	29	24	2	85%	1
2O01_CLA_J_2107	78%	6%	0.069	0.966	2.24	2.67	15	25	13	2	94%	1
2O01_CLA_B_1227	78%	5%	0.056	0.983	2.42	2.98	16	27	22	1	77%	1
2O01_CLA_B_1207	76%	4%	0.067	0.976	2.28	3.12	17	30	20	2	85%	1
2O01_CLA_B_1203	75%	6%	0.055	0.979	2.32	2.76	12	26	19	1	74%	1
2O01_CLA_L_1503	74%	2%	0.056	0.982	2.95	3.74	24	31	79	1	71%	1
2O01_CLA_B_1208	74%	4%	0.067	0.967	2.4	3.1	17	35	16	2	85%	1
2O01_CLA_B_1220	73%	5%	0.08	0.967	2.19	2.99	16	28	30	2	92%	1
2O01_CLA_A_1128	72%	6%	0.074	0.972	2.36	2.61	17	26	13	2	85%	1
2O01_CLA_B_1238	72%	5%	0.076	0.979	2.42	2.96	15	30	22	1	83%	1
2O01_CLA_A_1122	72%	5%	0.075	0.972	2.41	2.82	17	27	5	2	85%	1
2O01_CLA_A_1108	71%	4%	0.064	0.97	2.4	3.01	15	25	11	1	77%	1
2O01_CLA_A_1129	71%	5%	0.076	0.972	2.4	2.88	16	29	20	2	85%	1
2O01_CLA_B_1222	71%	8%	0.094	0.965	2.12	2.49	13	29	14	2	100%	1
2O01_CLA_H_1501	71%	5%	0.077	0.972	2.35	2.83	15	30	13	2	85%	1
2O01_CLA_A_1137	71%	6%	0.076	0.97	2.37	2.75	16	27	25	2	85%	1
2O01_CLA_B_9022	71%	3%	0.077	0.975	2.41	3.39	16	30	19	1	83%	1
2O01_CLA_B_1239	71%	6%	0.078	0.973	2.35	2.75	15	26	29	2	85%	1
2O01_CLA_4_1304	71%	6%	0.076	0.969	2.32	2.69	14	27	17	2	85%	1
2O01_CLA_G_1233	70%	5%	0.059	0.952	2.49	2.81	16	21	12	1	78%	1
2O01_CLA_B_1205	70%	5%	0.08	0.973	2.31	3	15	26	21	2	85%	1
2O01_CLA_B_1219	70%	5%	0.071	0.971	2.44	2.9	13	25	14	1	78%	1
2O01_CLA_A_1126	70%	4%	0.082	0.974	2.41	3.05	18	32	25	2	85%	1
2O01_CLA_I_1204	69%	6%	0.081	0.971	2.36	2.67	16	26	11	2	85%	1
2O01_CLA_B_1214	69%	5%	0.074	0.978	2.52	2.85	17	27	35	1	75%	1
2O01_CLA_A_1115	69%	4%	0.066	0.971	2.5	3	17	26	8	1	72%	1
2O01_CLA_A_1123	69%	5%	0.081	0.967	2.42	2.81	17	25	32	2	85%	1
2O01_CLA_A_9011	68%	5%	0.085	0.973	2.28	2.91	16	29	24	2	85%	1
2O01_CLA_B_1231	68%	4%	0.071	0.981	2.59	2.99	15	22	3	1	71%	1
2O01_CLA_B_1228	68%	4%	0.083	0.968	2.37	3.15	18	28	24	2	85%	1
2O01_CLA_B_1232	67%	6%	0.084	0.965	2.34	2.78	14	22	7	2	85%	1
2O01_CLA_A_1113	67%	4%	0.078	0.972	2.44	3.14	15	28	8	1	77%	1
2O01_CLA_B_1217	66%	4%	0.077	0.968	2.49	3	18	24	16	1	77%	1
2O01_CLA_B_1234	66%	5%	0.084	0.979	2.45	2.83	15	25	26	1	77%	1
2O01_CLA_B_1237	66%	4%	0.084	0.975	2.42	3.26	14	28	13	1	78%	1
2O01_CLA_B_1225	66%	3%	0.072	0.976	2.6	3.5	16	30	43	1	69%	1
2O01_CLA_B_1235	66%	5%	0.09	0.97	2.38	2.78	16	23	26	2	85%	1
2O01_CLA_L_1502	66%	5%	0.084	0.974	2.46	2.77	15	25	22	1	78%	1
2O01_CLA_B_1212	66%	6%	0.098	0.965	2.25	2.69	15	26	22	2	92%	1
2O01_CLA_B_1202	66%	3%	0.083	0.975	2.52	3.4	16	28	43	1	77%	1
2O01_CLA_L_1130	64%	5%	0.085	0.973	2.46	2.74	16	27	20	1	77%	1
2O01_CLA_F_1302	64%	6%	0.096	0.972	2.29	2.74	14	26	26	2	85%	1
2O01_CLA_B_1224	64%	6%	0.091	0.978	2.35	2.63	17	27	18	1	78%	1
2O01_CLA_B_9023	64%	4%	0.083	0.978	2.47	3	18	26	16	1	72%	1
2O01_CLA_B_1236	64%	3%	0.079	0.973	2.54	3.21	15	23	13	1	71%	1
2O01_CLA_B_1221	63%	5%	0.083	0.972	2.45	2.9	14	27	22	1	74%	1
2O01_CLA_A_1103	63%	4%	0.085	0.979	2.51	3.1	15	23	23	1	72%	1
2O01_CLA_A_1140	62%	5%	0.1	0.969	2.39	2.91	15	27	29	2	85%	1
2O01_CLA_B_1216	62%	6%	0.1	0.965	2.37	2.72	14	26	25	2	86%	1
2O01_CLA_F_1240	62%	5%	0.044	0.982	2.38	2.98	8	20	2	1	38%	1
2O01_CLA_F_1139	62%	4%	0.081	0.974	2.49	3.02	12	24	22	1	68%	1
2O01_CLA_2_2008	60%	5%	0.049	0.981	2.32	2.86	8	19	0	1	38%	1
2O01_CLA_3_3003	60%	6%	0.042	0.969	2.37	2.7	8	17	0	1	38%	1
2O01_CLA_A_1131	60%	4%	0.084	0.971	2.71	2.83	14	26	11	1	68%	1
2O01_CLA_B_9012	60%	5%	0.108	0.97	2.44	2.87	16	33	23	2	85%	1
2O01_CLA_B_1229	59%	3%	0.093	0.965	2.67	3.19	17	24	14	1	75%	1
2O01_CLA_A_1135	59%	4%	0.088	0.97	2.52	3.02	16	21	7	1	69%	1
2O01_CLA_3_3007	58%	5%	0.051	0.977	2.28	2.94	8	17	1	1	38%	1
2O01_CLA_B_9010	58%	4%	0.093	0.967	2.52	3.13	17	30	27	1	72%	1
2O01_CLA_2_2007	58%	5%	0.051	0.973	2.31	2.89	8	19	2	1	38%	1
2O01_CLA_A_9013	57%	5%	0.095	0.97	2.51	2.8	16	25	24	1	71%	1
2O01_CLA_1_1014	57%	5%	0.052	0.973	2.34	2.86	8	19	0	1	38%	1
2O01_CLA_1_1006	57%	5%	0.053	0.974	2.33	2.8	8	17	2	1	38%	1
2O01_CLA_A_1106	57%	3%	0.086	0.971	2.46	3.47	14	26	15	1	63%	1
2O01_CLA_1_1012	57%	5%	0.06	0.984	2.32	2.97	8	19	3	1	38%	1
2O01_CLA_A_1110	56%	5%	0.054	0.973	2.34	2.93	8	19	3	1	38%	1
2O01_CLA_A_1132	56%	5%	0.059	0.981	2.37	2.8	9	19	11	1	38%	1
2O01_CLA_B_1242	56%	4%	0.099	0.968	2.57	3.03	17	21	24	1	72%	1
2O01_CLA_A_1119	56%	6%	0.111	0.958	2.39	2.73	14	25	10	2	85%	1
2O01_CLA_A_1146	56%	6%	0.056	0.973	2.41	2.72	8	18	1	1	38%	1
2O01_CLA_A_1104	56%	6%	0.055	0.971	2.3	2.62	8	16	0	1	38%	1
2O01_CLA_3_3002	56%	5%	0.05	0.962	2.36	2.81	8	18	2	1	38%	1
2O01_CLA_B_1223	55%	5%	0.062	0.981	2.39	2.83	9	17	5	1	38%	1
2O01_CLA_4_4013	55%	5%	0.06	0.974	2.36	2.85	8	18	1	1	38%	1
2O01_CLA_A_1133	54%	5%	0.058	0.969	2.41	2.73	9	18	2	1	38%	1
2O01_CLA_A_1101	54%	5%	0.066	0.98	2.35	2.96	8	19	4	1	38%	1
2O01_CLA_B_1211	54%	5%	0.065	0.978	2.3	2.91	8	19	8	1	38%	1
2O01_CLA_A_1124	54%	5%	0.06	0.969	2.39	2.93	7	18	14	1	38%	1
2O01_CLA_3_2009	53%	5%	0.062	0.972	2.34	2.83	8	18	0	1	38%	1
2O01_CLA_L_1504	53%	6%	0.114	0.951	2.29	2.78	15	23	12	2	85%	1
2O01_CLA_A_1117	53%	6%	0.063	0.973	2.32	2.77	8	18	0	1	38%	1
2O01_CLA_3_3005	53%	5%	0.064	0.974	2.33	2.94	9	19	5	1	38%	1
2O01_CLA_2_2013	53%	5%	0.067	0.978	2.37	2.77	8	18	0	1	38%	1
2O01_CLA_K_1153	53%	6%	0.063	0.971	2.27	2.72	8	19	0	1	38%	1
2O01_CLA_A_1120	53%	5%	0.065	0.973	2.38	2.9	8	18	1	1	38%	1
2O01_CLA_A_1109	53%	3%	0.066	0.978	2.98	2.94	10	14	13	1	37%	1
2O01_CLA_A_1151	52%	6%	0.059	0.961	2.36	2.76	8	18	0	1	38%	1
2O01_CLA_3_3015	52%	6%	0.057	0.957	2.33	2.75	8	19	0	1	38%	1
2O01_CLA_1_1011	52%	5%	0.062	0.964	2.36	2.82	8	18	0	1	38%	1
2O01_CLA_B_1226	52%	5%	0.072	0.98	2.37	2.78	8	19	5	1	38%	1
2O01_CLA_2_2003	51%	5%	0.064	0.966	2.33	2.99	10	19	1	1	38%	1
2O01_CLA_B_1301	51%	5%	0.062	0.961	2.44	2.76	8	19	3	1	38%	1
2O01_CLA_2_2004	51%	5%	0.074	0.98	2.39	2.84	8	20	3	1	38%	1
2O01_CLA_K_1141	50%	6%	0.063	0.959	2.33	2.71	8	17	5	1	38%	1
2O01_CLA_3_3006	50%	6%	0.069	0.969	2.33	2.79	8	19	1	1	38%	1
2O01_CLA_3_3013	50%	5%	0.068	0.966	2.35	2.8	8	19	0	1	38%	1
2O01_CLA_4_4002	50%	6%	0.064	0.959	2.29	2.83	8	19	0	1	38%	1
2O01_CLA_G_1248	50%	5%	0.072	0.972	2.33	2.98	10	19	4	1	38%	1
2O01_CLA_1_1003	50%	6%	0.071	0.97	2.31	2.75	8	17	3	1	38%	1
2O01_CLA_A_1134	50%	5%	0.074	0.974	2.31	2.89	8	20	7	1	38%	1
2O01_CLA_3_3008	49%	5%	0.071	0.968	2.36	2.91	8	17	0	1	38%	1
2O01_CLA_3_3010	49%	6%	0.074	0.973	2.32	2.74	8	17	2	1	38%	1
2O01_CLA_A_1147	49%	5%	0.066	0.959	2.35	2.8	8	18	6	1	38%	1
2O01_CLA_4_4003	49%	6%	0.067	0.959	2.36	2.73	8	19	0	1	38%	1
2O01_CLA_A_1118	49%	5%	0.07	0.964	2.38	2.88	9	19	7	1	38%	1
2O01_CLA_3_3011	49%	6%	0.072	0.967	2.36	2.72	8	17	0	1	38%	1
2O01_CLA_4_4009	49%	5%	0.067	0.958	2.33	2.84	8	17	0	1	38%	1
2O01_CLA_B_1206	49%	5%	0.079	0.978	2.36	2.86	9	20	5	1	38%	1
2O01_CLA_K_1150	49%	5%	0.071	0.964	2.34	2.83	8	19	0	1	38%	1
2O01_CLA_B_1213	49%	6%	0.08	0.979	2.32	2.79	8	18	1	1	38%	1
2O01_CLA_2_2010	49%	5%	0.067	0.957	2.35	2.86	8	18	0	1	38%	1
2O01_CLA_4_4011	49%	6%	0.073	0.967	2.32	2.75	8	17	1	1	38%	1
2O01_CLA_3_3004	49%	5%	0.075	0.97	2.37	2.84	9	19	2	1	38%	1
2O01_CLA_J_1307	48%	5%	0.066	0.954	2.4	2.77	8	19	0	1	38%	1
2O01_CLA_A_1105	48%	6%	0.08	0.977	2.3	2.81	8	18	3	1	38%	1
2O01_CLA_L_1125	48%	6%	0.067	0.955	2.37	2.75	8	17	0	1	38%	1
2O01_CLA_J_1308	48%	5%	0.073	0.965	2.36	2.9	8	17	0	1	38%	1
2O01_CLA_1_1013	48%	5%	0.072	0.963	2.37	2.77	8	18	3	1	38%	1
2O01_CLA_4_4012	48%	4%	0.077	0.971	2.49	2.94	9	19	1	1	38%	1
2O01_CLA_A_1102	48%	5%	0.078	0.971	2.37	2.79	8	18	0	1	38%	1
2O01_CLA_A_1142	47%	6%	0.075	0.965	2.35	2.76	8	18	0	1	38%	1
2O01_CLA_2_2002	47%	6%	0.076	0.966	2.34	2.77	8	18	2	1	38%	1
2O01_CLA_F_1305	47%	6%	0.068	0.951	2.31	2.81	8	18	0	1	38%	1
2O01_CLA_1_1010	47%	5%	0.077	0.965	2.36	2.79	8	19	0	1	38%	1
2O01_CLA_B_1230	47%	6%	0.086	0.98	2.34	2.71	8	17	6	1	38%	1
2O01_CLA_4_4007	47%	5%	0.076	0.962	2.4	2.83	8	18	0	1	38%	1
2O01_CLA_A_1144	46%	5%	0.078	0.965	2.3	2.87	8	18	0	1	38%	1
2O01_CLA_4_4004	46%	6%	0.075	0.959	2.36	2.76	10	17	0	1	38%	1
2O01_CLA_1_1008	46%	5%	0.072	0.952	2.37	2.8	8	18	1	1	38%	1
2O01_CLA_2_2005	46%	5%	0.073	0.953	2.42	2.77	8	18	1	1	38%	1
2O01_CLA_4_1009	46%	6%	0.078	0.961	2.4	2.73	7	17	0	1	38%	1
2O01_CLA_1_1001	45%	6%	0.079	0.962	2.4	2.73	8	18	0	1	38%	1
2O01_CLA_A_1152	45%	6%	0.083	0.968	2.33	2.76	8	17	0	1	38%	1
2O01_CLA_1_1004	45%	6%	0.089	0.978	2.38	2.74	8	19	0	1	38%	1
2O01_CLA_F_1306	45%	5%	0.074	0.952	2.42	2.81	8	19	0	1	38%	1
2O01_CLA_A_1111	45%	5%	0.083	0.965	2.43	2.78	8	18	2	1	38%	1
2O01_CLA_B_1241	44%	5%	0.09	0.975	2.4	2.76	8	18	6	1	38%	1
2O01_CLA_2_2015	44%	6%	0.07	0.941	2.34	2.76	8	17	0	1	38%	1
2O01_CLA_4_4008	44%	5%	0.089	0.973	2.35	2.78	8	18	0	1	38%	1
2O01_CLA_2_2006	44%	6%	0.082	0.961	2.32	2.79	8	18	2	1	38%	1
2O01_CLA_3_3012	44%	6%	0.072	0.944	2.34	2.72	10	18	0	1	38%	1
2O01_CLA_1_1002	44%	5%	0.08	0.956	2.34	2.81	8	17	0	1	38%	1
2O01_CLA_2_2011	44%	5%	0.077	0.95	2.35	2.81	8	19	1	1	38%	1
2O01_CLA_A_1116	44%	5%	0.09	0.972	2.36	2.85	9	18	5	1	38%	1
2O01_CLA_H_1505	43%	5%	0.085	0.962	2.32	2.84	9	18	2	1	38%	1
2O01_CLA_F_1303	43%	5%	0.076	0.944	2.37	2.81	8	17	2	1	38%	1
2O01_CLA_A_1143	43%	5%	0.092	0.971	2.38	2.78	8	19	0	1	38%	1
2O01_CLA_F_4015	42%	5%	0.09	0.964	2.33	2.89	8	19	2	1	38%	1
2O01_CLA_B_1201	42%	5%	0.089	0.961	2.42	2.91	8	19	0	1	38%	1
2O01_CLA_4_4006	41%	5%	0.087	0.955	2.45	2.85	8	19	0	1	38%	1
2O01_CLA_4_4010	41%	5%	0.096	0.97	2.36	2.78	8	18	1	1	38%	1
2O01_CLA_4_4005	41%	5%	0.086	0.952	2.39	2.96	8	20	1	1	38%	1
2O01_CLA_2_2012	41%	5%	0.089	0.956	2.39	2.79	10	19	5	1	38%	1
2O01_CLA_A_1148	41%	5%	0.091	0.959	2.34	2.89	8	18	4	1	38%	1
2O01_CLA_1_1007	39%	6%	0.087	0.943	2.37	2.75	8	19	0	1	38%	1
2O01_CLA_2_2001	39%	5%	0.084	0.936	2.36	2.77	8	17	0	1	38%	1
2O01_CLA_A_1127	38%	5%	0.098	0.957	2.35	2.78	10	19	6	1	38%	1
2O01_CLA_B_1210	37%	5%	0.105	0.966	2.36	2.77	8	19	15	1	38%	1
2O01_CLA_3_3001	37%	5%	0.106	0.965	2.4	2.85	8	18	0	1	38%	1
2O01_CLA_3_3009	36%	5%	0.095	0.943	2.4	2.8	9	19	0	1	38%	1
2O01_CLA_1_1005	36%	5%	0.101	0.952	2.41	2.82	8	18	0	1	38%	1
2O01_CLA_A_1309	34%	6%	0.105	0.95	2.31	2.77	8	17	0	1	38%	1
2O01_CLA_4_4001	34%	5%	0.107	0.951	2.37	2.82	8	18	3	1	38%	1
7DKZ_CLA_B_828	82%	32%	0.071	0.971	1.23	1.44	8	13	2	1	100%	1
4XK8_CLA_b_803	79%	9%	0.072	0.963	2.05	2.47	20	30	8	1	100%	1
5L8R_CLA_A_839	78%	26%	0.078	0.969	1.35	1.64	6	12	7	1	100%	1
4Y28_CLA_B_1235	69%	7%	0.094	0.955	2.36	2.53	21	24	10	1	100%	1
6ZXS_CLA_B_807	69%	23%	0.1	0.963	1.35	1.83	7	16	6	1	100%	1
7M76_CLA_B_3041	100%	33%	0.015	0.999	1.25	1.37	7	8	4	1	100%	1
8OW6_CLA_B_601	100%	41%	0.016	0.998	1.2	1.02	12	4	0	1	100%	1
6PGK_CLA_G_842	100%	9%	0.024	0.997	2.21	2.22	21	25	9	1	100%	1
1VF5_CLA_B_201	97%	14%	0.039	0.993	1.61	2.22	9	17	9	3	100%	1
5V2C_CLA_d_403	97%	15%	0.034	0.984	1.7	2.01	14	23	4	1	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2O01 | pdb_00002o01

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 2O01 designated by the RCSB