NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2CKM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2CKM_NAG_A_1538 | 58% | 52% | 0.098 | 0.876 | 0.81 | 1.05 | - | 1 | 0 | 0 | 100% | 0.9333 |
2CKM_NAG_A_1537 | 15% | 43% | 0.169 | 0.726 | 1.02 | 1.2 | 1 | 2 | 0 | 0 | 100% | 0.9333 |
6G1U_NAG_B_602 | 82% | 89% | 0.085 | 0.938 | 0.25 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
6EZH_NAG_B_602 | 76% | 73% | 0.103 | 0.94 | 0.54 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
2VJB_NAG_B_1536 | 75% | 67% | 0.103 | 0.935 | 0.5 | 0.75 | - | 1 | 0 | 0 | 100% | 0.9333 |
2VJD_NAG_B_1537 | 73% | 69% | 0.09 | 0.917 | 0.55 | 0.63 | - | - | 2 | 0 | 100% | 0.9333 |
6G1V_NAG_B_602 | 71% | 84% | 0.088 | 0.907 | 0.32 | 0.44 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
4AKM_NAG_A_1379 | 100% | 67% | 0.029 | 0.994 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3CQL_NAG_B_244 | 100% | 68% | 0.029 | 0.987 | 0.42 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3RIK_NAG_D_509 | 100% | 8% | 0.035 | 0.991 | 2.03 | 2.54 | 4 | 7 | 2 | 0 | 100% | 0.9333 |
5VEM_NAG_B_509 | 100% | 74% | 0.003 | 0.957 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |