Ligand validation:2C38

AMP: ADENOSINE MONOPHOSPHATE

AMP is a Ligand Of Interest in 2C38 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
2C38_AMP_J_403	70%	78%	0.071	0.932	0.36	0.46	-	-	4	96%	1
2C38_AMP_N_403	70%	73%	0.075	0.938	0.33	0.59	-	-	1	96%	1
2C38_AMP_V_401	70%	62%	0.076	0.927	0.6	0.66	-	-	0	100%	1
2C38_AMP_H_402	69%	68%	0.08	0.941	0.49	0.57	-	-	0	96%	1
2C38_AMP_X_401	66%	60%	0.074	0.908	0.56	0.77	-	2	0	100%	1
2C38_AMP_H_403	66%	72%	0.074	0.915	0.34	0.59	-	-	1	96%	1
2C38_AMP_V_404	65%	62%	0.085	0.931	0.42	0.83	-	1	5	96%	1
2C38_AMP_H_404	65%	61%	0.084	0.929	0.44	0.84	-	2	4	96%	1
2C38_AMP_J_401	64%	49%	0.084	0.917	0.59	1.24	-	4	0	100%	1
2C38_AMP_B_402	64%	68%	0.084	0.924	0.32	0.72	-	1	0	96%	1
2C38_AMP_V_403	64%	70%	0.077	0.912	0.27	0.71	-	1	1	96%	1
2C38_AMP_F_401	64%	55%	0.087	0.918	0.57	0.99	-	3	0	100%	1
2C38_AMP_J_402	63%	69%	0.081	0.916	0.35	0.68	-	-	0	96%	1
2C38_AMP_V_402	62%	61%	0.084	0.917	0.49	0.81	-	-	0	96%	1
2C38_AMP_B_401	62%	53%	0.085	0.905	0.6	1.03	-	3	2	100%	1
2C38_AMP_X_402	62%	58%	0.081	0.908	0.44	0.98	-	1	0	96%	1
2C38_AMP_B_404	61%	62%	0.09	0.922	0.38	0.86	-	2	2	96%	1
2C38_AMP_X_403	60%	72%	0.082	0.902	0.38	0.56	-	-	0	96%	1
2C38_AMP_N_402	59%	73%	0.091	0.912	0.43	0.48	-	-	0	96%	1
2C38_AMP_H_401	58%	65%	0.079	0.879	0.53	0.64	-	1	0	100%	1
2C38_AMP_X_404	58%	72%	0.097	0.907	0.38	0.56	-	-	1	100%	1
2C38_AMP_F_402	57%	63%	0.091	0.902	0.43	0.78	-	-	0	96%	1
2C38_AMP_F_404	56%	59%	0.093	0.9	0.4	0.97	-	3	3	96%	1
2C38_AMP_J_404	56%	56%	0.096	0.905	0.41	1.07	-	3	3	96%	1
2C38_AMP_N_404	55%	62%	0.098	0.906	0.38	0.87	-	2	2	96%	1
2C38_AMP_F_403	55%	77%	0.083	0.878	0.4	0.44	-	-	2	96%	1
2C38_AMP_N_401	54%	59%	0.096	0.889	0.66	0.72	-	1	0	100%	1
2C38_AMP_B_403	54%	61%	0.08	0.872	0.27	1.02	-	2	1	96%	1
5WSC_AMP_C_501	100%	22%	0.015	0.999	1.41	1.79	5	10	3	100%	1
5WSB_AMP_B_501	100%	24%	0.016	0.998	1.42	1.71	4	7	2	100%	1
9XWU_AMP_A_301	100%	74%	0.018	0.997	0.43	0.47	-	-	0	100%	1
5WS9_AMP_B_503	100%	21%	0.021	0.997	1.48	1.79	5	11	1	100%	1
5WM7_AMP_A_601	100%	21%	0.021	0.996	1.41	1.86	5	10	0	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2C38 | pdb_00002c38

AMP: ADENOSINE MONOPHOSPHATE

AMP is a Ligand Of Interest in 2C38 designated by the RCSB