1OGY | pdb_00001ogy


MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE

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MGD is a Ligand Of Interest in 1OGY designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1OGY_MGD_E_1803 77% 21% 0.078 0.9641.81 1.5 14 500100%1
1OGY_MGD_A_1803 74% 16% 0.084 0.9612.16 1.47 14 800100%1
1OGY_MGD_M_1803 73% 21% 0.082 0.9541.88 1.42 11 700100%1
1OGY_MGD_A_1804 73% 17% 0.086 0.9581.8 1.76 10 700100%1
1OGY_MGD_G_1803 72% 20% 0.082 0.951.95 1.38 15 600100%1
1OGY_MGD_K_1803 71% 20% 0.084 0.9481.87 1.46 14 700100%1
1OGY_MGD_M_1804 71% 15% 0.086 0.9511.95 1.77 12 800100%1
1OGY_MGD_C_1803 70% 22% 0.086 0.9471.84 1.42 11 600100%1
1OGY_MGD_E_1804 64% 16% 0.1 0.9441.85 1.77 14 800100%1
1OGY_MGD_C_1804 63% 14% 0.104 0.9432 1.81 11 700100%1
1OGY_MGD_G_1804 62% 14% 0.098 0.932.02 1.81 18 800100%1
1OGY_MGD_O_1803 61% 12% 0.094 0.9162.67 1.42 16 800100%1
1OGY_MGD_K_1804 56% 14% 0.112 0.9241.88 1.88 11 1100100%1
1OGY_MGD_I_1803 53% 12% 0.109 0.9032.62 1.49 19 800100%1
1OGY_MGD_I_1804 48% 14% 0.112 0.8872.18 1.68 17 700100%1
1OGY_MGD_O_1804 47% 12% 0.119 0.8942.23 1.82 16 600100%1
8CM5_MGD_A_1105 100% 49% 0.017 0.9980.75 1.09 1 410100%1
5E7O_MGD_G_1003 100% 2% 0.021 0.9975.18 1.97 30 19 30100%1
8R3A_MGD_A_912 99% 51% 0.026 0.9940.81 0.95 2 320100%1
7Z5O_MGD_AAA_1101 99% 54% 0.027 0.9940.64 0.96 - 310100%1
8CM6_MGD_A_1103 99% 49% 0.028 0.9930.8 1.06 1 510100%1