PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 1MLY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1MLY_PLP_A_730 | 91% | 8% | 0.068 | 0.967 | 3.46 | 1.32 | 4 | 2 | 1 | 0 | 94% | 0.9375 |
1MLY_PLP_B_830 | 89% | 8% | 0.076 | 0.965 | 3.33 | 1.45 | 4 | 5 | 0 | 0 | 94% | 0.9375 |
1MGV_PLP_B_700 | 96% | 10% | 0.071 | 0.979 | 1.88 | 2.49 | 1 | 5 | 1 | 0 | 100% | 0.9375 |
1MLZ_PLP_B_530 | 91% | 6% | 0.077 | 0.973 | 3.41 | 1.63 | 4 | 3 | 8 | 0 | 94% | 0.9375 |
1S07_PLP_B_431 | 82% | 6% | 0.114 | 0.97 | 2.87 | 2.2 | 4 | 6 | 2 | 0 | 100% | 1 |
6ED7_PLP_B_601 | 73% | 46% | 0.15 | 0.988 | 1 | 1.09 | 1 | - | 0 | 0 | 94% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |