URI: URIDINE
URI is a Ligand Of Interest in 1LNX designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1LNX_URI_D_8006 | 5% | 23% | 0.424 | 0.841 | 1.64 | 1.54 | 1 | 6 | 6 | 0 | 100% | 0.9176 |
1LNX_URI_F_8001 | 4% | 30% | 0.389 | 0.784 | 1.57 | 1.25 | 2 | 3 | 3 | 0 | 100% | 0.9353 |
1LNX_URI_G_8002 | 4% | 30% | 0.448 | 0.842 | 1.47 | 1.32 | 3 | 5 | 8 | 0 | 100% | 1.0194 |
1LNX_URI_D_8005 | 3% | 31% | 0.477 | 0.829 | 1.45 | 1.29 | 1 | 4 | 3 | 0 | 100% | 0.8747 |
1LNX_URI_B_8004 | 2% | 25% | 0.394 | 0.693 | 1.82 | 1.25 | 3 | 4 | 3 | 0 | 100% | 1.0753 |
1LNX_URI_E_8007 | 2% | 34% | 0.415 | 0.68 | 1.6 | 1.03 | 2 | 1 | 3 | 0 | 100% | 1.0165 |
1LNX_URI_A_8003 | 1% | 31% | 0.447 | 0.612 | 1.67 | 1.09 | 3 | 2 | 3 | 0 | 100% | 1.0665 |
5M2T_URI_E_301 | 100% | 37% | 0.043 | 0.991 | 0.83 | 1.6 | - | 5 | 1 | 0 | 100% | 0.94 |
4R07_URI_B_901 | 97% | 19% | 0.068 | 0.982 | 1.42 | 2 | 5 | 7 | 1 | 0 | 100% | 1 |
3IVD_URI_B_603 | 95% | 63% | 0.071 | 0.976 | 0.53 | 0.86 | - | - | 0 | 0 | 100% | 1 |
4R08_URI_D_901 | 90% | 21% | 0.101 | 0.984 | 1.39 | 1.94 | 3 | 7 | 0 | 0 | 100% | 1 |
5C80_URI_C_301 | 85% | 18% | 0.099 | 0.965 | 1.23 | 2.24 | 2 | 9 | 0 | 0 | 100% | 1 |