Experiment: 9RCA

Solution NMR structure of the lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
2	2D 1H-13C HSQC	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
3	2D 1H-1H NOESY	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
4	2D 1H-1H TOCSY	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
5	3D HNHA	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
6	3D HNHB	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
7	3D 1H-15N NOESY	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
8	3D 1H-15N TOCSY	3 mM [U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
9	3D HNCA	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
10	3D HN(CO)CA	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
14	3D HNCACB	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
13	3D HN(COCA)CB	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
12	3D HNCO	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
11	3D HCACO	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
15	3D H(CCO)NH	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
16	3D HCCH-TOCSY	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700
17	3D 1H-13C NOESY aliphatic	7 mM [U-100% 13C; U-100% 15N] Lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex, 90 % H2O, 10 % [U-100% 2H] D2O, 20 mM potassium phosphate	90% H2O/10% D2O	0.02 M	5.5	1 atm	298	Bruker AVANCE NEO 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE NEO	700

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	20
Conformers Submitted Total Number	10
Representative Model	1 (medoid)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	X-PLOR NIH	3.8	Schwieters, Kuszewski, Tjandra and Clore
2	structure calculation	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	CcpNmr Analysis	2.5.2	CCPN
4	peak picking	CcpNmr Analysis	2.5.2	CCPN
5	processing	TopSpin	3.1	Bruker Biospin

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9RCA | pdb_00009rca

Solution NMR structure of the lipoyl domain of the E2 subunit in the human alpha-ketoglutarate dehydrogenase complex