9OD4 | pdb_00009od4

Solution structure of the Ebola Transcriptional Regulatory Signal - configuration B

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H NOESY	1.0 mM H ribonucleic acid	100% D2O	50 mM Tris HCl, 100 mM NaCl, 1 mM MgCl2 mM	7.5	100000 Pa	311	Bruker AVANCE III 800
2	2D 1H-1H NOESY	1.0 mM H ribonucleic acid	90% H2O/10% D2O	50 mM Tris HCl, 100 mM NaCl, 1 mM MgCl2 mM	7.5	100000 Pa	311	Bruker AVANCE III 800
3	2D 1H-13C HSQC	1.0 mM H ribonucleic acid	100% D2O	50 mM Tris HCl, 100 mM NaCl, 1 mM MgCl2 mM	7.5	100000 Pa	311	Bruker AVANCE III 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
simulated annealing		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	peak picking	NMRViewJ		NMRFx
2	chemical shift assignment	NMRViewJ		NMRFx
3	data analysis	CYANA		Guntert, Mumenthaler and Wuthrich
4	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
5	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore