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CryoEM structure of the human INO80-Hexasome complex
Refinement RMS Deviations Key Refinement Restraint Deviation r_mcangle_it 91.439 r_mcangle_other 91.427 r_scbond_it 67.588 r_scbond_other 67.584 r_mcbond_it 57.815 r_mcbond_other 57.788 r_dihedral_angle_3_deg 14.396 r_dihedral_angle_1_deg 8.445 r_dihedral_angle_2_deg 7.886 r_angle_refined_deg 2.178
RMS Deviations Key Refinement Restraint Deviation r_mcangle_it 91.439 r_mcangle_other 91.427 r_scbond_it 67.588 r_scbond_other 67.584 r_mcbond_it 57.815 r_mcbond_other 57.788 r_dihedral_angle_3_deg 14.396 r_dihedral_angle_1_deg 8.445 r_dihedral_angle_2_deg 7.886 r_angle_refined_deg 2.178 r_angle_other_deg 0.655 r_chiral_restr 0.091 r_gen_planes_refined 0.02 r_bond_refined_d 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample CryoEM structure of the human INO80-Hexasome complex Sample Components Histone Hexamer Synthetic deoxyribonucleic acid
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument LEICA EM GP Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 22161 Reported Resolution (Å) 4.86 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol FLEXIBLE FIT Refinement Target MAXIMUM LIKELIHOOD WITH PHASES Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 1
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 2600 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.5.3 CTF CORRECTION cryoSPARC 4.5.3 MODEL FITTING Coot 0.9.8.93 MODEL FITTING ISOLDE 1.8 INITIAL EULER ASSIGNMENT RELION 4.0 FINAL EULER ASSIGNMENT RELION 4.0 MODEL REFINEMENT REFMAC 5.8.0425
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 15713359 Minimum particle diameter (A) = 100
Maximum particle diameter (A) = 240