☰ Navigation Tabs
CryoET structure of the in vitro grown Bacillus anthracis Sap S-layer
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 17.622 f_angle_d 1.0196 f_chiral_restr 0.0633 f_bond_d 0.0087 f_plane_restr 0.0054
Sample in vitro S-layer of the Sap assembly domain
Specimen Preparation Sample Aggregation State 2D ARRAY Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SUBTOMOGRAM AVERAGING Number of Particles 10126 Reported Resolution (Å) 7.2 Resolution Method FSC 0.143 CUT-OFF Other Details Final half map reconstruction was done in Dynamo and resolution was estimated using RELION 3.1 postprocessing Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 3.8
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 2000 Maximum Defocus (nm) 3500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 81000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version VOLUME SELECTION Dynamo 1.1.401 IMAGE ACQUISITION SerialEM CTF CORRECTION Gctf 1.06 CTF CORRECTION NOVACTF FINAL EULER ASSIGNMENT Dynamo 1.1.478 RECONSTRUCTION Dynamo 1.1.478 RECONSTRUCTION RELION 3.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY