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Coxsackievirus A9 bound with compound 15 (CL278)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 8AT5
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument LEICA EM GP Cryogen Name ETHANE Sample Vitrification Details Sample was blotted from the front for 1.5 s.
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 2558 Reported Resolution (Å) 2.58 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (8at5) Refinement Space Refinement Protocol Refinement Target Overall B Value 82 Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON III (4k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TALOS ARCTICA Minimum Defocus (nm) 500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 150000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.2.0 IMAGE ACQUISITION EPU 2.11.0.2354REL CTF CORRECTION cryoSPARC 4.2.0 MODEL FITTING UCSF ChimeraX 1.5 INITIAL EULER ASSIGNMENT cryoSPARC 4.2.0 CLASSIFICATION RELION 3 RECONSTRUCTION cryoSPARC 4.2.0 MODEL REFINEMENT PHENIX 1.20.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 14445