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Cryo-EM structure of S. cerevisiae Rai1-Rat1-Rtt103(252-273) complex.
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
in silico model
Other
Sample
Cryo-EM structure of S. cerevisiae Rai1-Rat1-Rtt103(252-273) complex.
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
284130
Reported Resolution (Å)
2.65
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
Id
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Overall B Value
Fitting Procedure
Details
As initial model was used previously estimated ScRai1-Rat1 dimer. The position of investigated peptide was predicted by AlphaFold and manually built i ...
As initial model was used previously estimated ScRai1-Rat1 dimer. The position of investigated peptide was predicted by AlphaFold and manually built into the corresponding cryo-EM using Coot. For final geometry estimation was used ISOLDE.