9F3E

Single acyclic phosphonate nucleotide (R)-ZNA modification on DNA duplex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0 mM6.381 atm278Bruker AVANCE II 600
22D NOESY0 mM6.381 atm278Bruker AVANCE II 600
32D 1H-1H COSY0 mM6.381 atm278Bruker AVANCE II 600
42D 1H-13C HSQC aliphatic0 mM6.381 atm278Bruker AVANCE II 600
52D 1H-13C HSQC aromatic0 mM6.381 atm278Bruker AVANCE II 600
92D 1H-13C HMBC aromatic0 mM6.381 atm278Bruker AVANCE II 600
62D TOCSY0 mM6.381 atm278Bruker AVANCE II 600
72D 1H-31P COSY0 mM6.381 atm278Bruker AVANCE 500
82D DQF-COSY0 mM6.381 atm278Bruker AVANCE II 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE II600
2BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCARAKeller and Wuthrich
2structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
3refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
4peak pickingXEASYBartels et al.