De novo design of proteins that bind naphthalenediimides, powerful photooxidants with tunable photophysical properties
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-13C HSQC | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| 2 | 2D 1H-15N HSQC | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| 3 | 3D C(CO)NH | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| 4 | 3D CBCA(CO)NH | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| 5 | 3D HNCACB | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| 6 | 3D HNCA | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| 7 | 3D NOESY | 0.2 mM [U-100% 13C; U-100% 15N] protein 1 | 90% H2O/10% D2O | 200 mM | 7.5 | 1 atm | 298 | Bruker AVANCE DRX 800 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE DRX | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| na | CS-ROSETTA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | all calculated structures submitted |
| Conformers Calculated Total Number | 10 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | chemical shift assignment | TopSpin | Bruker Biospin | |
| 2 | structure calculation | CS-ROSETTA | Shen, Vernon, Baker and Bax | |
