9CE9

Solution NMR structure of the fungal loosenin PcaLOOL12 from Phanerochaete carnosa

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
2	2D 1H-13C HSQC aliphatic	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
3	3D 1H-13C NOESY aliphatic	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
4	3D 1H-13C NOESY aromatic	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
5	3D 1H-15N NOESY	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
10	3D HNCO	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
9	3D HNCA	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
8	3D CBCA(CO)NH	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
7	3D HNCACB	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
6	3D C(CO)NH	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
11	2D 1H-13C HSQC aliphatic	0.8 mM [U-10% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
12	Deuterium exchange	0.4 mM [U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
13	3D 1H-15N TOCSY	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
14	2D 1H-13C HSQC aromatic	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600
15	3D HNCACO	0.8 mM [U-99% 13C; U-99% 15N] PcaLOOL12, 100 mM sodium chloride, 20 mM TRIS	93% H2O/7% D2O	0.12 mM	7	1 atm	293	Varian VNMRS 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	VNMRS	600

NMR Refinement
Method	Details	Software
torsion angle dynamics	STRUCTURE DETERMINATION WAS PERFORMED ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) AFTER ADDING 10% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE RESTRAINTS AND THE VDW	CYANA

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	data analysis	Poky		Manthey, Tonelli, Clos II, Rahimi, Markley and Lee
2	structure calculation	CYANA	1.2	Guntert, Mumenthaler and Wuthrich
3	refinement	CNSSOLVE	1.3	Brunger, Adams, Clore, Gros, Nilges and Read
4	data analysis	TALOS+		Shen, Delaglio, Cornilescu and Bax
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7	data analysis	PSVS	1.5	Bhattacharya and Montelione

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.