8X8T

NMR structure of p75NTR juxtamembrane domain in complex with RhoGDI N-terminal domain containing a phosphorylation-mimicking S34D mutation

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
2	2D 1H-13C HSQC	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
3	3D CBCA(CO)NH	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
4	3D HNCACB	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
5	3D H(CCCO)NH	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
6	3D CC(CO)NH	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
7	3D HCCH-TOCSY	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
8	3D 13C,13C-NOESY	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
9	3D 15N,13C-NOESY	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
10	3D 13C,15N-filtered NOESY	0.8 mM [U-13C; U-15N] RhoGDI-NTD, 2.4 mM NA p75NTR-JMD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
11	2D 1H-15N HSQC	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
12	3D HCCH-TOCSY	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
13	3D CBCA(CO)NH	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
14	3D HNCACB	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
15	3D H(CCCO)NH	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
16	3D CC(CO)NH	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
17	3D 13C,13C-NOESY	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
18	3D 15N,13C-NOESY	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800
19	3D 13C,15N-filtered NOESY	0.8 mM [U-13C; U-15N] p75NTR-JMD, 2.4 mM NA RhoGDI-NTD	90% H2O/10% D2O	10 mM	6.8	1 Pa	293	Bruker AVANCE 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
torsion angle dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber		Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2	structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	NMRView		Johnson, One Moon Scientific
4	data analysis	NMRView		Johnson, One Moon Scientific
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax