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Crystal Structure of Human Cytochrome P450 2C9*27 (R150L) Genetic Variant in Complex with the Drug Losartan
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 291 0.3M Sodium Acetate Trihydrate
0.1 M Tris pH 7.5
25% w/v PEG 2000 MME
Crystal Properties Matthews coefficient Solvent content 4 69.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.89 α = 90 b = 142.17 β = 90 c = 163.07 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 S 16M 2021-05-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL12-2 0.97 SSRL BL12-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.53 50.01 99.8 0.038 0.996 12.8 5.8 29365
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.53 2.6 99.9 0.121 0.95 5.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.53 50.01 27822 1494 99.81 0.15423 0.15092 0.1879 0.21531 0.2345 RANDOM 60.981
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.97 0.02 1.95
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.953 r_dihedral_angle_4_deg 22.049 r_long_range_B_refined 16.457 r_long_range_B_other 16.035 r_dihedral_angle_3_deg 15.912 r_scangle_other 9.547 r_mcangle_it 6.912 r_mcangle_other 6.911 r_dihedral_angle_1_deg 6.658 r_scbond_it 6.639
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.953 r_dihedral_angle_4_deg 22.049 r_long_range_B_refined 16.457 r_long_range_B_other 16.035 r_dihedral_angle_3_deg 15.912 r_scangle_other 9.547 r_mcangle_it 6.912 r_mcangle_other 6.911 r_dihedral_angle_1_deg 6.658 r_scbond_it 6.639 r_scbond_other 6.554 r_mcbond_it 4.916 r_mcbond_other 4.913 r_angle_refined_deg 2.052 r_angle_other_deg 1.49 r_chiral_restr 0.156 r_bond_refined_d 0.017 r_gen_planes_refined 0.01 r_gen_planes_other 0.004 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3676 Nucleic Acid Atoms Solvent Atoms 171 Heterogen Atoms 116
Software Software Software Name Purpose REFMAC refinement SCALA data scaling iMOSFLM data reduction BALBES phasing