8UNG
Solution structure of toxin, U-RDTX-Pp19, from assassin bug Pristhesancus plagipennis
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC | 1 mM Unlabelled pp19, 50 mM sodium phosphate | 95% H2O/5% D2O | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE III HD 600 |
2 | 2D 1H-15N HSQC | 1 mM Unlabelled pp19, 50 mM sodium phosphate | 95% H2O/5% D2O | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE III HD 600 |
3 | 2D 1H-1H NOESY | 1 mM Unlabelled pp19, 50 mM sodium phosphate | 95% H2O/5% D2O | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE III HD 600 |
4 | 2D 1H-1H TOCSY | 1 mM Unlabelled pp19, 50 mM sodium phosphate | 95% H2O/5% D2O | 50 mM | 6 | 1 atm | 298 | Bruker AVANCE III HD 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III HD | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | Stereochemical properties |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (target function) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | CcpNmr Analysis | CCPN | |
2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
3 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
4 | peak picking | CcpNmr Analysis | CCPN | |
5 | collection | TopSpin | Bruker Biospin | |
6 | processing | TopSpin | Bruker Biospin | |
7 | geometry optimization | TALOS-N | Cornilescu, Delaglio and Bax |