8SED
Structure of a new ShKT peptide from the sea anemone Telmatactis stephensoni: ShKT-Ts1
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1 g/L [U-15N] 15N-ShKT-Ts1 | 90% H2O/10% D2O | 5 | 1 atm | 298 | Bruker AVANCE III 600 | |
| 2 | 3D 1H-15N NOESY | 1 g/L [U-15N] 15N-ShKT-Ts1 | 90% H2O/10% D2O | 5 | 1 atm | 298 | Bruker AVANCE III 600 | |
| 3 | 3D 1H-15N TOCSY | 1 g/L [U-15N] 15N-ShKT-Ts1 | 90% H2O/10% D2O | 5 | 1 atm | 298 | Bruker AVANCE III 600 | |
| 4 | 2D 1H-1H NOESY | 0.307 mM ShKT-Ts1 | 90% H2O/10% D2O | 5 | 1 atm | 298 | Bruker AVANCE III 600 | |
| 5 | 2D 1H-1H TOCSY | 0.307 mM ShKT-Ts1 | 90% H2O/10% D2O | 5 | 1 atm | 298 | Bruker AVANCE III 600 | |
| 6 | 2D 1H-13C HSQC | 0.307 mM ShKT-Ts1 | 90% H2O/10% D2O | 5 | 1 atm | 298 | Bruker AVANCE III 600 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | ARIA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 800 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 5 | collection | TopSpin | Bruker Biospin | |
| 3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 1 | chemical shift assignment | CcpNmr Analysis | CCPN | |
| 2 | refinement | ARIA | Linge, O'Donoghue and Nilges | |
| 6 | peak picking | CcpNmr Analysis | CCPN | |
| 7 | structure calculation | ARIA | Linge, O'Donoghue and Nilges | |
