8JQ1
Solution NMR Structure of zinc fingers 1-2 (fragment 257-320) from human insulinoma-associated protein 1(INSM1)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
2 | 2D 1H-15N HSQC | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
3 | 3D 1H-15N NOESY | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
4 | 3D 1H-13C NOESY aliphatic | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
5 | 3D 1H-13C NOESY aromatic | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
6 | 3D HNCACB | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
7 | 3D HNCO | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
8 | 3D HBHA(CO)NH | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
9 | 3D CBCA(CO)NH | 2.0 % [U-13C; U-15N] ribonuclease | 90% H2O/10% D2O | 100 mM | 6.5 | 1 Pa | 298 | Bruker AVANCE 850 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 850 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | FMCGUI | Lemak A., Sunnergagen M., Gutmanas A., Doherty R., Wu B. | |
2 | structure calculation | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | data analysis | Sparky | Goddard |